Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
MACPF
begin
124
end
456
score
98.9079989079989
distance
2.817979
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
2.817979
seq distance
0
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
2.8496788
seq distance
0
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
2.8496788
seq distance
0
chain
D
Disordered
begin
108
end
143
score
100.0
distance
2.8496788
seq distance
0
chain
D
Disordered
begin
108
end
143
score
100.0
distance
2.8496788
seq distance
0
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
10.679332
seq distance
7
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
10.679332
seq distance
7
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
25.475805
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
25.475805
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.487078
seq distance
255
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.487078
seq distance
255
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
31.895489
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
31.895489
seq distance
False
chain
C
Disordered
begin
138
end
138
score
50.0
distance
38.381577
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
38.381577
seq distance
False
chain
E
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
39.28269
seq distance
48
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
39.28269
seq distance
48
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
40.879395
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
40.879395
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
41.16804
seq distance
380
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
41.16804
seq distance
380
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
41.596752
seq distance
224
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
41.596752
seq distance
224
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
43.518837
seq distance
335
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
43.518837
seq distance
335
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
46.211952
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
46.211952
seq distance
False
chain
F
EGF-like
begin
457
end
487
score
100.0
distance
46.418636
seq distance
292
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
46.418636
seq distance
292
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
46.48474
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
46.48474
seq distance
False
chain
F
Disordered
begin
516
end
538
score
100.0
distance
48.57471
seq distance
351
chain
D
Disordered
begin
516
end
538
score
100.0
distance
48.57471
seq distance
351
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
48.939102
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
48.939102
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
48.98272
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
48.98272
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
53.840675
seq distance
356
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
53.840675
seq distance
356
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
55.347923
seq distance
407
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
55.347923
seq distance
407
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
57.812813
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
57.812813
seq distance
False
chain
B
CCP 2
begin
616
end
691
score
99.2822966507177
distance
63.221954
seq distance
451
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
63.221954
seq distance
451
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
65.410324
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
65.410324
seq distance
False
chain
X
EGF-like
begin
451
end
455
score
54.090909090909086
distance
65.98642
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
65.98642
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
67.09402
seq distance
422
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
67.09402
seq distance
422
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
70.62473
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
70.62473
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
71.22213
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
71.22213
seq distance
False
chain
G
Disordered
begin
504
end
504
score
68.18181818181817
distance
71.680916
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
71.680916
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
72.47916
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
72.47916
seq distance
False
chain
X
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
73.554855
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
73.554855
seq distance
False
chain
A
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
76.25087
seq distance
464
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
76.25087
seq distance
464
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
80.17641
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
80.17641
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.544876
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.544876
seq distance
False
chain
W
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
82.7379
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
82.7379
seq distance
False
chain
F
Disordered
begin
219
end
240
score
100.0
distance
83.50745
seq distance
54
chain
D
Disordered
begin
219
end
240
score
100.0
distance
83.50745
seq distance
54
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
86.466805
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
86.466805
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
86.56096
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
86.56096
seq distance
False
chain
W
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
86.976364
seq distance
517
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
86.976364
seq distance
517
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.07664
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.07664
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.87133
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.87133
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.490486
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.490486
seq distance
False
chain
G
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
95.54291
seq distance
522
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
95.54291
seq distance
522
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
100.63592
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
100.63592
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
102.643486
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
102.643486
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.54552
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.54552
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.21684
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.21684
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.35549
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.35549
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
109.39443
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
109.39443
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.92076
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.92076
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
118.01436
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
118.01436
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
118.15543
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
118.15543
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.12586
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.12586
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.90775
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.90775
seq distance
False
chain
U
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
125.158195
seq distance
55
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
125.158195
seq distance
55
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
125.41582
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
125.41582
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.52885
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.52885
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
129.57428
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
129.57428
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
129.73569
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
129.73569
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.6806
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.6806
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.75005
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.75005
seq distance
False
chain
T
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
131.87546
seq distance
57
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
131.87546
seq distance
57
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.27449
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.27449
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
137.05525
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
137.05525
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.67792
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.67792
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.64047
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.64047
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
138.9047
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
138.9047
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.74065
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.74065
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
140.20676
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
140.20676
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
141.3244
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
141.3244
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.81712
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.81712
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
147.7334
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
147.7334
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
147.83781
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
147.83781
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
148.53607
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
148.53607
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
149.44757
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
149.44757
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
151.20813
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
151.20813
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.02219
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.02219
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
153.40039
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
153.40039
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
154.00792
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
154.00792
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.31218
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.31218
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.95183
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.95183
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
156.12198
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
156.12198
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.37651
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.37651
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.6233
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.6233
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
158.91971
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
158.91971
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
161.58757
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
161.58757
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
161.8668
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
161.8668
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
163.2617
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
163.2617
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.49678
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.49678
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
165.45802
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
165.45802
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.16544
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.16544
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
168.06622
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
168.06622
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.05336
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.05336
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
169.64268
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
169.64268
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
172.37875
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
172.37875
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.77956
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.77956
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.13268
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.13268
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
173.24277
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
173.24277
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.23007
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.23007
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.37065
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.37065
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
174.7516
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
174.7516
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.44766
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.44766
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.9375
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.9375
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
177.52205
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
177.52205
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
179.55675
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
179.55675
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
180.99883
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
180.99883
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
183.29854
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
183.29854
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
183.8485
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
183.8485
seq distance
False
chain
N
Details
Redox score
84.71
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
3.52
Half-sphere exposure sum
74
Minimum pKa
6.22
% buried
54
Peptide accession
P10643
Residue number A
128
Residue number B
165
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
CCP 2
begin
616
end
691
score
99.2822966507177
distance
2.8064775
seq distance
0
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
2.8064775
seq distance
0
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
2.8064775
seq distance
0
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
2.8064775
seq distance
0
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
2.8109024
seq distance
0
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
2.8109024
seq distance
0
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
8.722968
seq distance
3
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
8.722968
seq distance
3
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
20.903303
seq distance
12
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
20.903303
seq distance
12
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
25.255117
seq distance
56
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
25.255117
seq distance
56
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
35.78042
seq distance
61
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
35.78042
seq distance
61
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
45.102104
seq distance
519
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
45.102104
seq distance
519
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
46.72408
seq distance
478
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
46.72408
seq distance
478
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
48.68684
seq distance
143
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
48.68684
seq distance
143
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
49.155827
seq distance
50
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
49.155827
seq distance
50
chain
D
Disordered
begin
516
end
538
score
100.0
distance
59.542015
seq distance
61
chain
D
Disordered
begin
516
end
538
score
100.0
distance
59.542015
seq distance
61
chain
D
Disordered
begin
108
end
143
score
100.0
distance
62.056473
seq distance
456
chain
D
Disordered
begin
108
end
143
score
100.0
distance
62.056473
seq distance
456
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
67.733536
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
67.733536
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
71.33849
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
71.33849
seq distance
False
chain
A
Disordered
begin
585
end
589
score
50.90909090909091
distance
72.121574
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
72.121574
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
73.15508
seq distance
78
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
73.15508
seq distance
78
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
73.17228
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
73.17228
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
74.254036
seq distance
179
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
74.254036
seq distance
179
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
75.25177
seq distance
471
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
75.25177
seq distance
471
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
76.7436
seq distance
112
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
76.7436
seq distance
112
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
77.39779
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
77.39779
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
79.05397
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
79.05397
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
80.1078
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
80.1078
seq distance
False
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
81.54463
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
81.54463
seq distance
False
chain
X
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
82.13848
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
82.13848
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.81828
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.81828
seq distance
False
chain
X
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
85.06752
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
85.06752
seq distance
False
chain
F
Disordered
begin
41
end
41
score
70.45454545454545
distance
93.36184
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
93.36184
seq distance
False
chain
B
EGF-like
begin
451
end
455
score
54.090909090909086
distance
99.03852
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
99.03852
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
99.32301
seq distance
210
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
99.32301
seq distance
210
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
101.74372
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
101.74372
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
104.28437
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
104.28437
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.66725
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.66725
seq distance
False
chain
X
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
108.71385
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
108.71385
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
112.86211
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
112.86211
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
120.09898
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
120.09898
seq distance
False
chain
G
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
120.47239
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
120.47239
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
122.95852
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
122.95852
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
126.64966
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
126.64966
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.96443
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.96443
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
129.2186
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
129.2186
seq distance
False
chain
V
Disordered
begin
219
end
240
score
100.0
distance
133.1303
seq distance
359
chain
D
Disordered
begin
219
end
240
score
100.0
distance
133.1303
seq distance
359
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.33444
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.33444
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
142.0793
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
142.0793
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.4222
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.4222
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
146.72455
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
146.72455
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
153.19218
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
153.19218
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
154.41042
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
154.41042
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
160.79579
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
160.79579
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
163.22348
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
163.22348
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
166.81729
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
166.81729
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
169.15222
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
169.15222
seq distance
False
chain
X
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
170.98488
seq distance
379
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
170.98488
seq distance
379
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.40218
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.40218
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.18828
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.18828
seq distance
False
chain
W
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
177.21596
seq distance
377
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
177.21596
seq distance
377
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
178.23154
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
178.23154
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
178.77269
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
178.77269
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.26486
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.26486
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.93321
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.93321
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
183.97679
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
183.97679
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.1975
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.1975
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
186.98813
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
186.98813
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
194.26498
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
194.26498
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.92093
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.92093
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
198.72224
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
198.72224
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.19107
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.19107
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
200.35884
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
200.35884
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.12344
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.12344
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.51884
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.51884
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
203.99623
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
203.99623
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.32503
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.32503
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
212.1239
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
212.1239
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
213.47977
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
213.47977
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
214.01135
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
214.01135
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
216.00673
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
216.00673
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
216.87277
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
216.87277
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
218.09776
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
218.09776
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
220.53967
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
220.53967
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
220.96147
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
220.96147
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
222.08858
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
222.08858
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
223.45157
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
223.45157
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
225.08829
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
225.08829
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
228.33083
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
228.33083
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
228.835
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
228.835
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
229.07072
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
229.07072
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
230.66916
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
230.66916
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
230.689
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
230.689
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
232.40224
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
232.40224
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
233.18166
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
233.18166
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
234.63197
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
234.63197
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
236.53647
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
236.53647
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
237.86455
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
237.86455
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
240.21333
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
240.21333
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
241.68439
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
241.68439
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
242.06888
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
242.06888
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
244.35374
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
244.35374
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
244.67194
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
244.67194
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
245.23099
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
245.23099
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
245.71199
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
245.71199
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
246.9264
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
246.9264
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
247.78882
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
247.78882
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
247.90807
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
247.90807
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
248.93405
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
248.93405
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
252.58223
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
252.58223
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
254.37256
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
254.37256
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
255.88365
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
255.88365
seq distance
False
chain
M
Details
Redox score
81.73
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
3.73
Half-sphere exposure sum
52
Minimum pKa
9.24
% buried
15
Peptide accession
P10643
Residue number A
599
Residue number B
626
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Disordered
begin
516
end
538
score
100.0
distance
2.8086336
seq distance
0
chain
D
Disordered
begin
516
end
538
score
100.0
distance
2.8086336
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.8086336
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.8086336
seq distance
0
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
7.6063175
seq distance
2
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
7.6063175
seq distance
2
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
10.66222
seq distance
67
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
10.66222
seq distance
67
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
12.736797
seq distance
36
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
12.736797
seq distance
36
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
18.12384
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
18.12384
seq distance
False
chain
B
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
20.920605
seq distance
443
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
20.920605
seq distance
443
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
24.665413
seq distance
103
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
24.665413
seq distance
103
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
25.224953
seq distance
10
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
25.224953
seq distance
10
chain
D
Disordered
begin
108
end
143
score
100.0
distance
29.592888
seq distance
380
chain
D
Disordered
begin
108
end
143
score
100.0
distance
29.592888
seq distance
380
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
34.839127
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
34.839127
seq distance
False
chain
X
Disordered
begin
585
end
589
score
50.90909090909091
distance
35.027893
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
35.027893
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
35.219147
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
35.219147
seq distance
False
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
36.248604
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
36.248604
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
38.494366
seq distance
134
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
38.494366
seq distance
134
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
42.98583
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
42.98583
seq distance
False
chain
X
Disordered
begin
504
end
504
score
68.18181818181817
distance
44.75364
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
44.75364
seq distance
False
chain
C
LDL-receptor class A
begin
83
end
121
score
100.0
distance
46.41418
seq distance
402
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
46.41418
seq distance
402
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
50.370113
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
50.370113
seq distance
False
chain
C
Disordered
begin
219
end
240
score
100.0
distance
55.387974
seq distance
283
chain
D
Disordered
begin
219
end
240
score
100.0
distance
55.387974
seq distance
283
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
55.4305
seq distance
37
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
55.4305
seq distance
37
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
56.971138
seq distance
81
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
56.971138
seq distance
81
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
57.063953
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
57.063953
seq distance
False
chain
X
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
57.575462
seq distance
395
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
57.575462
seq distance
395
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
59.418713
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
59.418713
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
59.571465
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
59.571465
seq distance
False
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
60.321342
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
60.321342
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
66.0862
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
66.0862
seq distance
False
chain
W
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
66.17656
seq distance
52
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
66.17656
seq distance
52
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
68.33518
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
68.33518
seq distance
False
chain
A
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
71.732346
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
71.732346
seq distance
False
chain
W
Disordered
begin
138
end
138
score
50.0
distance
73.93936
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
73.93936
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
74.69612
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
74.69612
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
75.8111
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
75.8111
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
81.72995
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
81.72995
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.84287
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.84287
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
88.8355
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
88.8355
seq distance
False
chain
X
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
89.10926
seq distance
94
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
89.10926
seq distance
94
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
90.91123
seq distance
303
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
90.91123
seq distance
303
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
92.127594
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
92.127594
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
95.03203
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
95.03203
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.1008
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.1008
seq distance
False
chain
W
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
97.1146
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
97.1146
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
97.12958
seq distance
301
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
97.12958
seq distance
301
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
98.97335
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
98.97335
seq distance
False
chain
V
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
100.79375
seq distance
147
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
100.79375
seq distance
147
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
104.16421
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
104.16421
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
104.88377
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
104.88377
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
109.22068
seq distance
152
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
109.22068
seq distance
152
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
109.70282
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
109.70282
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
110.28416
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
110.28416
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
117.64037
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
117.64037
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
119.45797
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
119.45797
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.70907
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.70907
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
124.01887
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
124.01887
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.04295
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.04295
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
124.45952
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
124.45952
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
126.01198
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
126.01198
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
132.03253
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
132.03253
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
132.05185
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
132.05185
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.05504
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.05504
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
141.68408
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
141.68408
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
141.68977
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
141.68977
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
144.54587
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
144.54587
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.98341
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.98341
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.15155
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.15155
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.70314
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.70314
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
151.97101
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
151.97101
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.14659
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.14659
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
156.89856
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
156.89856
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
158.16371
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
158.16371
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
159.97664
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
159.97664
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
161.93584
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
161.93584
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.5048
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.5048
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
166.17784
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
166.17784
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
167.40686
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
167.40686
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
168.0235
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
168.0235
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.29555
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.29555
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.38437
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.38437
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.11131
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.11131
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.69205
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.69205
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
175.39357
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
175.39357
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
178.61246
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
178.61246
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.68083
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.68083
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
179.44481
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
179.44481
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
180.43051
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
180.43051
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
180.787
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
180.787
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
182.1845
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
182.1845
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.51248
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.51248
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.68854
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.68854
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
183.92274
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
183.92274
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.57286
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.57286
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.10785
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.10785
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.76346
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.76346
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.98634
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.98634
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.91266
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.91266
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.43164
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.43164
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.21259
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.21259
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
199.01056
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
199.01056
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.68799
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.68799
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.97496
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.97496
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
204.92958
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
204.92958
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.78386
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.78386
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.87149
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.87149
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.79678
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.79678
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.24228
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.24228
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.24893
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.24893
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
215.54308
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
215.54308
seq distance
False
chain
M
Details
Redox score
80.6
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
4.8
Half-sphere exposure sum
49
Minimum pKa
9.14
% buried
4.5
Peptide accession
P10643
Residue number A
523
Residue number B
535
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8040588
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8040588
seq distance
0
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
4.9483523
seq distance
1
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
4.9483523
seq distance
1
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
14.145845
seq distance
58
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
14.145845
seq distance
58
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
25.312286
seq distance
82
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
25.312286
seq distance
82
chain
A
Details
Redox score
77.81
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
34
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
702
Residue number B
713
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
CCP 1
begin
545
end
615
score
83.48271446862996
distance
2.8087249
seq distance
0
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
2.8087249
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.8087249
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.8087249
seq distance
0
chain
D
Disordered
begin
516
end
538
score
100.0
distance
5.4316173
seq distance
4
chain
D
Disordered
begin
516
end
538
score
100.0
distance
5.4316173
seq distance
4
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
12.781773
seq distance
56
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
12.781773
seq distance
56
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
17.290836
seq distance
9
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
17.290836
seq distance
9
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
19.24535
seq distance
432
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
19.24535
seq distance
432
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
28.069197
seq distance
25
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
28.069197
seq distance
25
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.622055
seq distance
92
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.622055
seq distance
92
chain
D
Disordered
begin
108
end
143
score
100.0
distance
30.289007
seq distance
369
chain
D
Disordered
begin
108
end
143
score
100.0
distance
30.289007
seq distance
369
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
30.73111
seq distance
27
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
30.73111
seq distance
27
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
31.668531
seq distance
391
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
31.668531
seq distance
391
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
32.161724
seq distance
71
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
32.161724
seq distance
71
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
38.1407
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
38.1407
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
38.506912
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
38.506912
seq distance
False
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
38.695107
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
38.695107
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
39.248695
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
39.248695
seq distance
False
chain
X
Disordered
begin
41
end
41
score
70.45454545454545
distance
39.560215
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
39.560215
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
41.46408
seq distance
42
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
41.46408
seq distance
42
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
42.07714
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
42.07714
seq distance
False
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
45.51374
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
45.51374
seq distance
False
chain
X
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
52.586304
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
52.586304
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
53.381813
seq distance
123
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
53.381813
seq distance
123
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
54.809444
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
54.809444
seq distance
False
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.127594
seq distance
384
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.127594
seq distance
384
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
58.398228
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
58.398228
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
59.49125
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
59.49125
seq distance
False
chain
A
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
65.06257
seq distance
84
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
65.06257
seq distance
84
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.19607
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.19607
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
70.02187
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
70.02187
seq distance
False
chain
W
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
70.292366
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
70.292366
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
71.162834
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
71.162834
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
75.338715
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
75.338715
seq distance
False
chain
W
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
77.470505
seq distance
137
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
77.470505
seq distance
137
chain
D
Disordered
begin
219
end
240
score
100.0
distance
78.85728
seq distance
272
chain
D
Disordered
begin
219
end
240
score
100.0
distance
78.85728
seq distance
272
chain
D
Disordered
begin
138
end
138
score
50.0
distance
82.595024
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
82.595024
seq distance
False
chain
E
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
85.2068
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
85.2068
seq distance
False
chain
F
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
86.2333
seq distance
142
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
86.2333
seq distance
142
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
86.89479
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
86.89479
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.449234
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.449234
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.71804
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.71804
seq distance
False
chain
W
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
95.74128
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
95.74128
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.065796
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.065796
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
103.95127
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
103.95127
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
112.60799
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
112.60799
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.59734
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.59734
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
113.98687
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
113.98687
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.89816
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.89816
seq distance
False
chain
V
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
115.7041
seq distance
292
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
115.7041
seq distance
292
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.89465
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.89465
seq distance
False
chain
W
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
121.94279
seq distance
290
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
121.94279
seq distance
290
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
123.62128
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
123.62128
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
128.15471
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
128.15471
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
130.44449
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
130.44449
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
131.91356
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
131.91356
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
134.12553
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
134.12553
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
136.53456
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
136.53456
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.97028
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.97028
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.13892
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.13892
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.33492
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.33492
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
148.60239
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
148.60239
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.3859
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.3859
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.07625
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.07625
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
154.04749
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
154.04749
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
154.5149
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
154.5149
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
155.7736
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
155.7736
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.08394
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.08394
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
160.32413
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
160.32413
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.42618
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.42618
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.24643
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.24643
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
171.10115
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
171.10115
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
171.9466
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
171.9466
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.98615
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.98615
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.28073
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.28073
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
176.66359
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
176.66359
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.72331
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.72331
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
179.39363
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
179.39363
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.36772
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.36772
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.3767
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.3767
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.76216
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.76216
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
188.7041
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
188.7041
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
190.24025
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
190.24025
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.16182
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.16182
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
192.43011
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
192.43011
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.7128
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.7128
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
193.99391
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
193.99391
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.07396
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.07396
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.60182
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.60182
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
196.34119
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
196.34119
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
198.36186
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
198.36186
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.1449
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.1449
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.36702
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.36702
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
200.79306
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
200.79306
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
201.34206
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
201.34206
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
202.99014
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
202.99014
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
203.50319
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
203.50319
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.61215
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.61215
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.80383
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.80383
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.14365
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.14365
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
210.53906
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
210.53906
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
214.5742
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
214.5742
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
215.35469
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
215.35469
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
217.54904
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
217.54904
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
219.12677
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
219.12677
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
219.37834
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
219.37834
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
221.13885
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
221.13885
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.24309
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.24309
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
227.1588
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
227.1588
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.62042
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.62042
seq distance
False
chain
M
Details
Redox score
77.21
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
2.03
Half-sphere exposure sum
38
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
512
Residue number B
545
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
6
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
15.969687
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
15.969687
seq distance
6
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
64
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
64
chain
A
Details
Redox score
77.12
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
54
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
776
Residue number B
789
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8496232
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8496232
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
12.897362
seq distance
3
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
12.897362
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
19.274956
seq distance
13
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
19.274956
seq distance
13
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
40.781
seq distance
61
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
40.781
seq distance
61
chain
A
Details
Redox score
77.01
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
41
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
773
Residue number B
782
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
2.8261752
seq distance
0
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
2.8261752
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
5.1214547
seq distance
394
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
5.1214547
seq distance
394
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
11.949362
seq distance
61
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
11.949362
seq distance
61
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
18.475632
seq distance
437
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
18.475632
seq distance
437
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
18.636015
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
18.636015
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
19.865536
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
19.865536
seq distance
False
chain
C
Disordered
begin
516
end
538
score
100.0
distance
21.777836
seq distance
453
chain
D
Disordered
begin
516
end
538
score
100.0
distance
21.777836
seq distance
453
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
25.36659
seq distance
458
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
25.36659
seq distance
458
chain
D
Disordered
begin
108
end
143
score
100.0
distance
27.50232
seq distance
45
chain
D
Disordered
begin
108
end
143
score
100.0
distance
27.50232
seq distance
45
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
27.871424
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
27.871424
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
32.503468
seq distance
482
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
32.503468
seq distance
482
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
33.429016
seq distance
357
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
33.429016
seq distance
357
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
37.608746
seq distance
326
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
37.608746
seq distance
326
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
37.897686
seq distance
20
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
37.897686
seq distance
20
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
42.799393
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
42.799393
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
44.86323
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
44.86323
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
44.86323
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
44.86323
seq distance
False
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
50.992493
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
50.992493
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
54.535686
seq distance
509
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
54.535686
seq distance
509
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
54.63308
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
54.63308
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
54.74373
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
54.74373
seq distance
False
chain
F
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
57.267902
seq distance
65
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
57.267902
seq distance
65
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
57.721092
seq distance
553
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
57.721092
seq distance
553
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
59.1338
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
59.1338
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
59.229168
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
59.229168
seq distance
False
chain
B
Disordered
begin
219
end
240
score
100.0
distance
59.830704
seq distance
156
chain
D
Disordered
begin
219
end
240
score
100.0
distance
59.830704
seq distance
156
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.87878
seq distance
524
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.87878
seq distance
524
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
61.3376
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
61.3376
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
63.317852
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
63.317852
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
68.34122
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
68.34122
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
68.42226
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
68.42226
seq distance
False
chain
X
Disordered
begin
138
end
138
score
50.0
distance
78.42548
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
78.42548
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.80049
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.80049
seq distance
False
chain
X
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
86.98782
seq distance
566
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
86.98782
seq distance
566
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.0006
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.0006
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
88.55301
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
88.55301
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
88.86468
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
88.86468
seq distance
False
chain
A
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
92.63183
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
92.63183
seq distance
False
chain
W
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
95.17619
seq distance
157
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
95.17619
seq distance
157
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
97.3453
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
97.3453
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
97.38652
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
97.38652
seq distance
False
chain
W
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
101.175125
seq distance
159
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
101.175125
seq distance
159
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
102.08545
seq distance
619
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
102.08545
seq distance
619
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
104.58938
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
104.58938
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
106.687256
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
106.687256
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
109.609665
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
109.609665
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
110.32938
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
110.32938
seq distance
False
chain
G
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
111.90678
seq distance
624
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
111.90678
seq distance
624
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.33857
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.33857
seq distance
False
chain
P
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
114.08078
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
114.08078
seq distance
False
chain
B
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
116.586464
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
116.586464
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.17015
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.17015
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
122.83261
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
122.83261
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.02459
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.02459
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.88258
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.88258
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
128.63222
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
128.63222
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.2893
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.2893
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.83853
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.83853
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.61089
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.61089
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
141.67392
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
141.67392
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.77441
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.77441
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.64407
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.64407
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.8301
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.8301
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
147.86964
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
147.86964
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
148.14447
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
148.14447
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
148.70766
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
148.70766
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
156.18039
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
156.18039
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.58907
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.58907
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.80615
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.80615
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.46844
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.46844
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.65562
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.65562
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
167.9113
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
167.9113
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
168.60219
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
168.60219
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
168.76427
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
168.76427
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
169.63754
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
169.63754
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.95328
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.95328
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.8556
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.8556
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.2309
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.2309
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.71199
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.71199
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.96846
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.96846
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
181.79298
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
181.79298
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
185.9938
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
185.9938
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.28857
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.28857
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.65862
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.65862
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
186.72963
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
186.72963
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.14423
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.14423
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
188.72491
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
188.72491
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.02518
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.02518
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
190.97754
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
190.97754
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
191.67212
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
191.67212
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.51268
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.51268
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.74509
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.74509
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.84335
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.84335
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
194.07178
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
194.07178
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
194.63718
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
194.63718
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.32782
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.32782
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.32274
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.32274
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.5997
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.5997
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.7933
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.7933
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
208.53004
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
208.53004
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
210.32785
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
210.32785
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.64264
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.64264
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
213.45415
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
213.45415
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
213.98018
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
213.98018
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.6514
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.6514
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
219.90518
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
219.90518
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
221.07013
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
221.07013
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
222.88724
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
222.88724
seq distance
False
chain
N
Details
Redox score
77.01
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
2.03
Half-sphere exposure sum
60
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
28
Residue number B
63
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.789243
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.789243
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.107202
seq distance
28
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.107202
seq distance
28
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
17.56117
seq distance
9
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
17.56117
seq distance
9
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.0101
seq distance
52
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.0101
seq distance
52
chain
A
Details
Redox score
76.92
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
64
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
721
Residue number B
743
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
CCP 2
begin
594
end
671
score
100.0
distance
2.8213007
seq distance
0
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
2.8213007
seq distance
0
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
2.8213007
seq distance
0
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
2.8213007
seq distance
0
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
6.34132
seq distance
1
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
6.34132
seq distance
1
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
16.144056
seq distance
6
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
16.144056
seq distance
6
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
22.615614
seq distance
7
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
22.615614
seq distance
7
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
29.655682
seq distance
31
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
29.655682
seq distance
31
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
32.881084
seq distance
44
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
32.881084
seq distance
44
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
45.813137
seq distance
83
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
45.813137
seq distance
83
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
53.141594
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
53.141594
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
58.964268
seq distance
72
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
58.964268
seq distance
72
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
78.311424
seq distance
538
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
78.311424
seq distance
538
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
79.5248
seq distance
110
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
79.5248
seq distance
110
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
80.5043
seq distance
579
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
80.5043
seq distance
579
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
81.489365
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
81.489365
seq distance
False
chain
A
MACPF
begin
102
end
434
score
94.85394485394487
distance
81.76623
seq distance
203
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
81.76623
seq distance
203
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
83.63925
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
83.63925
seq distance
False
chain
B
Disordered
begin
494
end
516
score
100.0
distance
87.875916
seq distance
121
chain
C
Disordered
begin
494
end
516
score
100.0
distance
87.875916
seq distance
121
chain
C
Disordered
begin
86
end
121
score
100.0
distance
92.7477
seq distance
516
chain
C
Disordered
begin
86
end
121
score
100.0
distance
92.7477
seq distance
516
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
95.12959
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
95.12959
seq distance
False
chain
B
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
99.28726
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
99.28726
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
101.52004
seq distance
531
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
101.52004
seq distance
531
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
101.7924
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
101.7924
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
102.99239
seq distance
239
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
102.99239
seq distance
239
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
105.036804
seq distance
138
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
105.036804
seq distance
138
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
105.367195
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
105.367195
seq distance
False
chain
D
EGF-like
begin
435
end
465
score
100.0
distance
109.2882
seq distance
172
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
109.2882
seq distance
172
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
109.92725
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
109.92725
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
111.88921
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
111.88921
seq distance
False
chain
D
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
116.20761
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
116.20761
seq distance
False
chain
E
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
117.59646
seq distance
280
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
117.59646
seq distance
280
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
126.435684
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
126.435684
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
128.99849
seq distance
270
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
128.99849
seq distance
270
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
132.89229
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
132.89229
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
132.93402
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
132.93402
seq distance
False
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
137.2563
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
137.2563
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
140.1185
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
140.1185
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
140.17328
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
140.17328
seq distance
False
chain
F
MACPF
begin
324
end
332
score
83.08080808080808
distance
148.04
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
148.04
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.07835
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.07835
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
153.193
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
153.193
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
155.42867
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
155.42867
seq distance
False
chain
E
Disordered
begin
197
end
218
score
76.85950413223141
distance
163.5858
seq distance
419
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
163.5858
seq distance
419
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
165.54338
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
165.54338
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
167.94456
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
167.94456
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.95946
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.95946
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.0319
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.0319
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
184.6293
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
184.6293
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
188.3288
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
188.3288
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.9938
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.9938
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.82631
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.82631
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
199.79935
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
199.79935
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
203.22292
seq distance
439
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
203.22292
seq distance
439
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
209.50304
seq distance
437
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
209.50304
seq distance
437
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
210.47562
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
210.47562
seq distance
False
chain
I
Details
Redox score
76.75
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.01
Half-sphere exposure sum
51
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
659 (Residue 637 in this structure)
Residue number B
688 (Residue 666 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8466582
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8466582
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
8.648576
seq distance
3
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
8.648576
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
17.044876
seq distance
19
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
17.044876
seq distance
19
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
61
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
61
chain
A
Details
Redox score
76.73
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
5.88
Half-sphere exposure sum
47
Minimum pKa
nan
% buried
1.5
Peptide accession
P10643
Residue number A
773
Residue number B
776
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.7865968
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.7865968
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
7.3639283
seq distance
380
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
7.3639283
seq distance
380
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
8.560025
seq distance
4
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
8.560025
seq distance
4
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.994443
seq distance
25
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.994443
seq distance
25
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.512271
seq distance
41
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.512271
seq distance
41
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
18.895031
seq distance
46
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
18.895031
seq distance
46
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
22.987291
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
22.987291
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
24.973307
seq distance
317
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.973307
seq distance
317
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
25.221754
seq distance
40
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
25.221754
seq distance
40
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.59978
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.59978
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.711212
seq distance
71
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.711212
seq distance
71
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.197184
seq distance
81
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.197184
seq distance
81
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.200748
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.200748
seq distance
False
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
28.586592
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
28.586592
seq distance
False
chain
B
EGF-like
begin
451
end
455
score
54.090909090909086
distance
33.267887
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
33.267887
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
33.611668
seq distance
70
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
33.611668
seq distance
70
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
35.292625
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
35.292625
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
LDL-receptor class A
begin
61
end
99
score
100.0
distance
41.13251
seq distance
339
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
41.13251
seq distance
339
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
44.19972
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
44.19972
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.498783
seq distance
220
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.498783
seq distance
220
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.314472
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.314472
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.314472
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.314472
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.656612
seq distance
332
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.656612
seq distance
332
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
56.235794
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
56.235794
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
58.717113
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
58.717113
seq distance
False
chain
E
Sushi 1
begin
547
end
606
score
100.0
distance
58.905155
seq distance
94
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
58.905155
seq distance
94
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
61.845478
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
61.845478
seq distance
False
chain
G
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
63.253056
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
63.253056
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
63.6405
seq distance
141
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
63.6405
seq distance
141
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.73213
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.73213
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
68.77994
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
68.77994
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
68.907555
seq distance
112
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
68.907555
seq distance
112
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.03622
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.03622
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
80.95107
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
80.95107
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.384026
seq distance
240
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.384026
seq distance
240
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.9256
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.9256
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
92.76738
seq distance
238
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
92.76738
seq distance
238
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
93.87035
seq distance
154
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
93.87035
seq distance
154
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.67331
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.67331
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
98.779335
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
98.779335
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.68166
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.68166
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
105.52416
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
105.52416
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
105.6437
seq distance
207
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
105.6437
seq distance
207
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.244446
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.244446
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
107.663895
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
107.663895
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.07677
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.07677
seq distance
False
chain
H
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
117.33873
seq distance
212
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
117.33873
seq distance
212
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.80659
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.80659
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.69887
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.69887
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
138.9169
seq distance
220
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
138.9169
seq distance
220
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
150.4625
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
150.4625
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
164.5149
seq distance
296
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
164.5149
seq distance
296
chain
C
Details
Redox score
76.72
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.03
Half-sphere exposure sum
68
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
460 (Residue 438 in this structure)
Residue number B
475 (Residue 453 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
CCP 1
begin
545
end
615
score
83.48271446862996
distance
2.8146024
seq distance
0
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
2.8146024
seq distance
0
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
2.8181598
seq distance
0
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
2.8181598
seq distance
0
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
3.8909845
seq distance
3
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
3.8909845
seq distance
3
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
10.947288
seq distance
16
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
10.947288
seq distance
16
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
27.36524
seq distance
491
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
27.36524
seq distance
491
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
29.062557
seq distance
22
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
29.062557
seq distance
22
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
30.290915
seq distance
16
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
30.290915
seq distance
16
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
31.178986
seq distance
115
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
31.178986
seq distance
115
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
33.747597
seq distance
450
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
33.747597
seq distance
450
chain
D
Disordered
begin
516
end
538
score
100.0
distance
39.87089
seq distance
33
chain
D
Disordered
begin
516
end
538
score
100.0
distance
39.87089
seq distance
33
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
44.3472
seq distance
69
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
44.3472
seq distance
69
chain
D
Disordered
begin
108
end
143
score
100.0
distance
50.554058
seq distance
428
chain
D
Disordered
begin
108
end
143
score
100.0
distance
50.554058
seq distance
428
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
53.044178
seq distance
50
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
53.044178
seq distance
50
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
53.993233
seq distance
74
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
53.993233
seq distance
74
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
56.356342
seq distance
151
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
56.356342
seq distance
151
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
57.14339
seq distance
84
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
57.14339
seq distance
84
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
57.15276
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
57.15276
seq distance
False
chain
C
Disordered
begin
585
end
589
score
50.90909090909091
distance
58.070534
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
58.070534
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
60.960052
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
60.960052
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
61.774338
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
61.774338
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
61.972263
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
61.972263
seq distance
False
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
62.316986
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
62.316986
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
64.65802
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
64.65802
seq distance
False
chain
A
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
64.9154
seq distance
443
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
64.9154
seq distance
443
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
65.518394
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
65.518394
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
68.48004
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
68.48004
seq distance
False
chain
X
Disordered
begin
41
end
41
score
70.45454545454545
distance
74.28975
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
74.28975
seq distance
False
chain
B
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
75.2935
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
75.2935
seq distance
False
chain
F
EGF-like
begin
451
end
455
score
54.090909090909086
distance
80.961876
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
80.961876
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
81.305
seq distance
182
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
81.305
seq distance
182
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
82.6871
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
82.6871
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
89.9222
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
89.9222
seq distance
False
chain
W
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
93.1381
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
93.1381
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.53744
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.53744
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
94.21669
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
94.21669
seq distance
False
chain
X
Disordered
begin
138
end
138
score
50.0
distance
101.11576
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
101.11576
seq distance
False
chain
E
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
104.35133
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
104.35133
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
106.15677
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
106.15677
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
109.63368
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
109.63368
seq distance
False
chain
F
Disordered
begin
219
end
240
score
100.0
distance
113.207245
seq distance
331
chain
D
Disordered
begin
219
end
240
score
100.0
distance
113.207245
seq distance
331
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.402336
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.402336
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
117.532875
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
117.532875
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
120.39827
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
120.39827
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.581024
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.581024
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
129.19098
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
129.19098
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
135.37383
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
135.37383
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.83139
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.83139
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
144.87625
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
144.87625
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.44016
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.44016
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.68336
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.68336
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
150.50182
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
150.50182
seq distance
False
chain
P
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
150.65807
seq distance
351
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
150.65807
seq distance
351
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
151.03694
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
151.03694
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
155.66023
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
155.66023
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
156.65796
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
156.65796
seq distance
False
chain
U
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
156.86021
seq distance
349
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
156.86021
seq distance
349
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
161.77344
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
161.77344
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.39717
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.39717
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.97382
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.97382
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.59268
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.59268
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
170.67857
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
170.67857
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
170.81021
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
170.81021
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
173.96577
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
173.96577
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.61945
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.61945
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
177.59035
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
177.59035
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
181.95534
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
181.95534
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.56503
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.56503
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.46506
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.46506
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
190.31346
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
190.31346
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
191.79164
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
191.79164
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.85667
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.85667
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.80629
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.80629
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.23267
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.23267
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
195.72798
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
195.72798
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.22862
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.22862
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
202.49248
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
202.49248
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
204.70604
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
204.70604
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.90344
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.90344
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
207.91617
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
207.91617
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
209.49017
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
209.49017
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
211.02371
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
211.02371
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
211.53699
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
211.53699
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.2604
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.2604
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
213.40884
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
213.40884
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
214.02887
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
214.02887
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
217.92531
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
217.92531
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
218.10808
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
218.10808
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
219.43054
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
219.43054
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
220.77147
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
220.77147
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
222.44034
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
222.44034
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
222.56517
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
222.56517
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
223.08612
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
223.08612
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
223.94775
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
223.94775
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
225.8095
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
225.8095
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.6653
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.6653
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
228.97621
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
228.97621
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
230.97563
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
230.97563
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
232.33458
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
232.33458
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
232.43684
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
232.43684
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
232.76292
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
232.76292
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
233.20114
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
233.20114
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
235.14096
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
235.14096
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
237.0026
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
237.0026
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
237.1341
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
237.1341
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
239.62589
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
239.62589
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
243.39232
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
243.39232
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
245.84625
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
245.84625
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
247.0624
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
247.0624
seq distance
False
chain
M
Details
Redox score
76.72
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
2.03
Half-sphere exposure sum
54
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
571
Residue number B
613
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.8385603
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.8385603
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
9.763513
seq distance
397
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
9.763513
seq distance
397
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
12.944417
seq distance
21
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
12.944417
seq distance
21
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
14.191348
seq distance
14
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
14.191348
seq distance
14
chain
C
Disordered
begin
494
end
516
score
100.0
distance
15.538734
seq distance
30
chain
C
Disordered
begin
494
end
516
score
100.0
distance
15.538734
seq distance
30
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
23.07404
seq distance
35
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
23.07404
seq distance
35
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
23.55115
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
23.55115
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
23.56202
seq distance
88
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
23.56202
seq distance
88
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
23.870605
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
23.870605
seq distance
False
chain
D
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
26.064802
seq distance
98
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
26.064802
seq distance
98
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
26.516417
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
26.516417
seq distance
False
chain
B
Disordered
begin
86
end
121
score
100.0
distance
26.599152
seq distance
334
chain
C
Disordered
begin
86
end
121
score
100.0
distance
26.599152
seq distance
334
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
27.14673
seq distance
57
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
27.14673
seq distance
57
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.514221
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.514221
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.284504
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.284504
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
38.00805
seq distance
59
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
38.00805
seq distance
59
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
38.554276
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
38.554276
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
39.105885
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
39.105885
seq distance
False
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
40.31713
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
40.31713
seq distance
False
chain
E
LDL-receptor class A
begin
61
end
99
score
100.0
distance
42.06069
seq distance
356
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
42.06069
seq distance
356
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
42.209843
seq distance
237
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
42.209843
seq distance
237
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
47.717556
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
47.717556
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.74333
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.74333
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.74333
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.74333
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.509483
seq distance
349
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.509483
seq distance
349
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
54.34755
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
54.34755
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
57.327408
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
57.327408
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
58.654095
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
58.654095
seq distance
False
chain
G
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.59034
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.59034
seq distance
False
chain
E
Sushi 1
begin
547
end
606
score
100.0
distance
63.250404
seq distance
83
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
63.250404
seq distance
83
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
64.367676
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
64.367676
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
65.51665
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
65.51665
seq distance
False
chain
F
CCP 2
begin
594
end
671
score
100.0
distance
68.066124
seq distance
130
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
68.066124
seq distance
130
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
73.08217
seq distance
101
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
73.08217
seq distance
101
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
77.202324
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
77.202324
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
82.093735
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
82.093735
seq distance
False
chain
A
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
82.922615
seq distance
257
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
82.922615
seq distance
257
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
84.686005
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
84.686005
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
89.42008
seq distance
255
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
89.42008
seq distance
255
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.6928
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.6928
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
94.624756
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
94.624756
seq distance
False
chain
I
Sushi 2
begin
607
end
668
score
100.0
distance
97.961205
seq distance
143
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
97.961205
seq distance
143
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.58966
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.58966
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
101.72301
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
101.72301
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.76574
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.76574
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
109.634056
seq distance
196
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
109.634056
seq distance
196
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
109.64696
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
109.64696
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.07258
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.07258
seq distance
False
chain
H
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
121.41442
seq distance
201
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
121.41442
seq distance
201
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.701706
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.701706
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
132.0021
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
132.0021
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
142.94228
seq distance
209
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
142.94228
seq distance
209
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
153.87614
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
153.87614
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
168.50378
seq distance
285
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
168.50378
seq distance
285
chain
C
Details
Redox score
76.68
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.06
Half-sphere exposure sum
57
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
477 (Residue 455 in this structure)
Residue number B
486 (Residue 464 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8466582
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8466582
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
8.648576
seq distance
6
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
8.648576
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
17.044876
seq distance
13
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
17.044876
seq distance
13
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
64
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
64
chain
A
Details
Redox score
76.38
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
5.91
Half-sphere exposure sum
50
Minimum pKa
nan
% buried
1.5
Peptide accession
P10643
Residue number A
776
Residue number B
782
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.817033
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.817033
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
10.269443
seq distance
51
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
10.269443
seq distance
51
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
10.50434
seq distance
472
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
10.50434
seq distance
472
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
21.41526
seq distance
427
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
21.41526
seq distance
427
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
23.019737
seq distance
10
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
23.019737
seq distance
10
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
23.475254
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
23.475254
seq distance
False
chain
D
Sushi 1
begin
547
end
606
score
100.0
distance
26.182554
seq distance
496
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
26.182554
seq distance
496
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
27.01808
seq distance
384
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
27.01808
seq distance
384
chain
C
Disordered
begin
494
end
516
score
100.0
distance
29.98692
seq distance
443
chain
C
Disordered
begin
494
end
516
score
100.0
distance
29.98692
seq distance
443
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
30.912384
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
30.912384
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
31.080103
seq distance
514
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
31.080103
seq distance
514
chain
C
Disordered
begin
86
end
121
score
100.0
distance
31.87107
seq distance
35
chain
C
Disordered
begin
86
end
121
score
100.0
distance
31.87107
seq distance
35
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
34.34578
seq distance
543
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
34.34578
seq distance
543
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
36.45533
seq distance
448
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
36.45533
seq distance
448
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
38.489174
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
38.489174
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
38.861008
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
38.861008
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
39.581543
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
39.581543
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
40.17391
seq distance
347
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
40.17391
seq distance
347
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
45.234497
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
45.234497
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
45.898006
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
45.898006
seq distance
False
chain
D
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
48.91195
seq distance
306
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
48.91195
seq distance
306
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.793354
seq distance
55
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.793354
seq distance
55
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
52.121925
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
52.121925
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
56.18613
seq distance
316
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
56.18613
seq distance
316
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
59.863186
seq distance
556
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
59.863186
seq distance
556
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
60.87853
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
60.87853
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
62.184883
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
62.184883
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
65.25632
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
65.25632
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
67.897255
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
67.897255
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
68.4529
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
68.4529
seq distance
False
chain
B
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.58438
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.58438
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
72.184685
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
72.184685
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
74.75325
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
74.75325
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
74.86197
seq distance
609
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
74.86197
seq distance
609
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
80.220406
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
80.220406
seq distance
False
chain
A
Disordered
begin
197
end
218
score
76.85950413223141
distance
86.76656
seq distance
146
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
86.76656
seq distance
146
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
87.479805
seq distance
614
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
87.479805
seq distance
614
chain
C
Disordered
begin
138
end
138
score
50.0
distance
87.92157
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
87.92157
seq distance
False
chain
F
MACPF
begin
324
end
332
score
83.08080808080808
distance
94.85232
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
94.85232
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
95.57293
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
95.57293
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
99.17188
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
99.17188
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
104.36113
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
104.36113
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.410545
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.410545
seq distance
False
chain
G
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
109.66082
seq distance
622
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
109.66082
seq distance
622
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
115.58308
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
115.58308
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
119.06538
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
119.06538
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
122.28134
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
122.28134
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
122.62525
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
122.62525
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
124.75462
seq distance
147
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
124.75462
seq distance
147
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
125.68586
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
125.68586
seq distance
False
chain
A
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
130.66273
seq distance
149
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
130.66273
seq distance
149
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.04015
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.04015
seq distance
False
chain
H
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
133.02072
seq distance
698
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
133.02072
seq distance
698
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.44548
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.44548
seq distance
False
chain
I
Details
Redox score
76.31
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.04
Half-sphere exposure sum
50
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
39 (Residue 17 in this structure)
Residue number B
73 (Residue 51 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.807806
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.807806
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
13.290964
seq distance
35
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
13.290964
seq distance
35
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
19.374163
seq distance
10
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
19.374163
seq distance
10
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
27.033096
seq distance
93
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
27.033096
seq distance
93
chain
A
Details
Redox score
76.23
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
52
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
805
Residue number B
838
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
10.76358
seq distance
3
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
10.76358
seq distance
3
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
12.729168
seq distance
21
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
12.729168
seq distance
21
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
27.740646
seq distance
45
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
27.740646
seq distance
45
chain
A
Details
Redox score
76.23
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
49
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
715
Residue number B
750
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.78732
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.78732
seq distance
0
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
9.441742
seq distance
27
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
9.441742
seq distance
27
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
85
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
85
chain
A
Details
Redox score
76.13
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
62
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
797
Residue number B
818
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
21
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
21
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
79
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
79
chain
A
Details
Redox score
76.13
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
66
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
791
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8058136
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8058136
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
11.229217
seq distance
8
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
11.229217
seq distance
8
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
27.07384
seq distance
32
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
27.07384
seq distance
32
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
32.90835
seq distance
16
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
32.90835
seq distance
16
chain
A
Details
Redox score
76.13
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
2.03
Half-sphere exposure sum
56
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
728
Residue number B
763
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.854038
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.854038
seq distance
0
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
5.9805665
seq distance
97
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
5.9805665
seq distance
97
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
13.293757
seq distance
117
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
13.293757
seq distance
117
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
18.891226
seq distance
115
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
18.891226
seq distance
115
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
61.620193
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
61.620193
seq distance
False
chain
B
Disordered
begin
510
end
522
score
53.67132867132868
distance
61.644688
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
61.644688
seq distance
False
chain
D
EGF-like
begin
435
end
465
score
100.0
distance
67.64763
seq distance
104
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
67.64763
seq distance
104
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
70.55413
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
70.55413
seq distance
False
chain
D
Disordered
begin
494
end
516
score
100.0
distance
71.461586
seq distance
163
chain
C
Disordered
begin
494
end
516
score
100.0
distance
71.461586
seq distance
163
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
71.461586
seq distance
147
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
71.461586
seq distance
147
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
75.69647
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
75.69647
seq distance
False
chain
D
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
76.13286
seq distance
257
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
76.13286
seq distance
257
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
77.46965
seq distance
36
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
77.46965
seq distance
36
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
78.66938
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
78.66938
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
81.4519
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
81.4519
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
84.99834
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
84.99834
seq distance
False
chain
E
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
88.60153
seq distance
26
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
88.60153
seq distance
26
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
91.218636
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
91.218636
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
91.261955
seq distance
168
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
91.261955
seq distance
168
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
92.151436
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
92.151436
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
92.458206
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
92.458206
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
96.72554
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
96.72554
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
96.86398
seq distance
67
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
96.86398
seq distance
67
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
97.37138
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
97.37138
seq distance
False
chain
H
Disordered
begin
86
end
121
score
100.0
distance
97.40357
seq distance
194
chain
C
Disordered
begin
86
end
121
score
100.0
distance
97.40357
seq distance
194
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
99.738655
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
99.738655
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.42285
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.42285
seq distance
False
chain
H
MACPF
begin
324
end
333
score
84.54545454545456
distance
103.671265
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
103.671265
seq distance
False
chain
I
Disordered
begin
138
end
138
score
50.0
distance
103.80279
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
103.80279
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
105.899475
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
105.899475
seq distance
False
chain
B
CCP 1
begin
523
end
593
score
100.0
distance
109.91742
seq distance
192
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
109.91742
seq distance
192
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
111.26951
seq distance
216
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
111.26951
seq distance
216
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.88423
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.88423
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
113.406075
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
113.406075
seq distance
False
chain
I
Disordered
begin
91
end
92
score
68.18181818181817
distance
115.45143
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
115.45143
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
115.45143
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
115.45143
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
116.12095
seq distance
209
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
116.12095
seq distance
209
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
116.83117
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
116.83117
seq distance
False
chain
E
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
121.56389
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
121.56389
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.00205
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.00205
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
129.8779
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
129.8779
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
133.47134
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
133.47134
seq distance
False
chain
H
Sushi 1
begin
547
end
606
score
100.0
distance
135.52538
seq distance
216
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
135.52538
seq distance
216
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
139.98512
seq distance
263
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
139.98512
seq distance
263
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
140.67226
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
140.67226
seq distance
False
chain
I
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
141.55771
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
141.55771
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
145.19772
seq distance
234
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
145.19772
seq distance
234
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
169.65027
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
169.65027
seq distance
False
chain
B
Sushi 2
begin
607
end
668
score
100.0
distance
171.63713
seq distance
276
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
171.63713
seq distance
276
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
183.2007
seq distance
329
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
183.2007
seq distance
329
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
194.47438
seq distance
334
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
194.47438
seq distance
334
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
215.68698
seq distance
342
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
215.68698
seq distance
342
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
225.21739
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
225.21739
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
241.7393
seq distance
418
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
241.7393
seq distance
418
chain
C
Details
Redox score
76.12
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.04
Half-sphere exposure sum
53
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
337 (Residue 315 in this structure)
Residue number B
353 (Residue 331 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.7987742
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.7987742
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.419828
seq distance
1
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.419828
seq distance
1
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
5.273106
seq distance
377
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
5.273106
seq distance
377
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
9.81254
seq distance
27
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
9.81254
seq distance
27
chain
C
Disordered
begin
494
end
516
score
100.0
distance
11.901647
seq distance
43
chain
C
Disordered
begin
494
end
516
score
100.0
distance
11.901647
seq distance
43
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
15.656078
seq distance
48
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
15.656078
seq distance
48
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.166243
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.166243
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
22.719585
seq distance
314
chain
C
Disordered
begin
86
end
121
score
100.0
distance
22.719585
seq distance
314
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
24.870333
seq distance
37
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
24.870333
seq distance
37
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.176613
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.176613
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
27.923115
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
27.923115
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
28.226913
seq distance
72
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
28.226913
seq distance
72
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
28.967176
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
28.967176
seq distance
False
chain
D
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
30.453465
seq distance
78
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
30.453465
seq distance
78
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
32.266907
seq distance
68
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
32.266907
seq distance
68
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.070145
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.070145
seq distance
False
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
34.855526
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
34.855526
seq distance
False
chain
B
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.549587
seq distance
336
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.549587
seq distance
336
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
39.740067
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
39.740067
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
46.435677
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
46.435677
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.13991
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.13991
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.13991
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.13991
seq distance
False
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.215897
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.215897
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.89676
seq distance
329
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.89676
seq distance
329
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.27577
seq distance
96
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.27577
seq distance
96
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
53.373314
seq distance
217
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
53.373314
seq distance
217
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
57.477924
seq distance
143
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
57.477924
seq distance
143
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
57.625233
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
57.625233
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
59.298843
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
59.298843
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
61.408623
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
61.408623
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
61.94432
seq distance
114
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
61.94432
seq distance
114
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
64.12117
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
64.12117
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.15015
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.15015
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
72.30994
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
72.30994
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
77.478745
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
77.478745
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
84.372505
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
84.372505
seq distance
False
chain
H
Sushi 2
begin
607
end
668
score
100.0
distance
87.77458
seq distance
156
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
87.77458
seq distance
156
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.51423
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.51423
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
92.581856
seq distance
237
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
92.581856
seq distance
237
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
95.290886
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
95.290886
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
98.80885
seq distance
235
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
98.80885
seq distance
235
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.07353
seq distance
209
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.07353
seq distance
209
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
102.829384
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
102.829384
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.460335
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.460335
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
106.06868
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
106.06868
seq distance
False
chain
B
Disordered
begin
327
end
328
score
61.36363636363637
distance
108.935104
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
108.935104
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.243706
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.243706
seq distance
False
chain
I
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.8388
seq distance
214
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.8388
seq distance
214
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
118.15354
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
118.15354
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
127.0321
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
127.0321
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.60039
seq distance
222
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.60039
seq distance
222
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.85297
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.85297
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
146.21225
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
146.21225
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.04236
seq distance
298
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.04236
seq distance
298
chain
C
Details
Redox score
76.03
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.03
Half-sphere exposure sum
79
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
457 (Residue 435 in this structure)
Residue number B
473 (Residue 451 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Disordered
begin
86
end
121
score
100.0
distance
2.7897003
seq distance
0
chain
C
Disordered
begin
86
end
121
score
100.0
distance
2.7897003
seq distance
0
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.7897003
seq distance
0
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.7897003
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.0554366
seq distance
5
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.0554366
seq distance
5
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
13.171203
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
13.171203
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
14.042864
seq distance
9
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
14.042864
seq distance
9
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
21.3894
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
21.3894
seq distance
False
chain
D
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.368557
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.368557
seq distance
False
chain
E
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
34.631916
seq distance
23
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
34.631916
seq distance
23
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
37.218433
seq distance
260
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
37.218433
seq distance
260
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
37.84759
seq distance
426
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
37.84759
seq distance
426
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
38.403194
seq distance
301
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
38.403194
seq distance
301
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
39.3896
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
39.3896
seq distance
False
chain
D
TSP type-1 2
begin
478
end
527
score
100.0
distance
44.886562
seq distance
381
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
44.886562
seq distance
381
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
47.767235
seq distance
270
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
47.767235
seq distance
270
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
48.111076
seq distance
338
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
48.111076
seq distance
338
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
50.510685
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
50.510685
seq distance
False
chain
E
Sushi 1
begin
547
end
606
score
100.0
distance
53.08477
seq distance
450
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
53.08477
seq distance
450
chain
C
Disordered
begin
138
end
138
score
50.0
distance
53.6832
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
53.6832
seq distance
False
chain
F
Disordered
begin
494
end
516
score
100.0
distance
56.247425
seq distance
397
chain
C
Disordered
begin
494
end
516
score
100.0
distance
56.247425
seq distance
397
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
59.36211
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
59.36211
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
60.43114
seq distance
468
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
60.43114
seq distance
468
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
60.647797
seq distance
402
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
60.647797
seq distance
402
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
61.567806
seq distance
497
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
61.567806
seq distance
497
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
62.06087
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
62.06087
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
62.06858
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
62.06858
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
62.698982
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
62.698982
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
64.61838
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
64.61838
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
65.108376
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
65.108376
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
65.53429
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
65.53429
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
67.961754
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
67.961754
seq distance
False
chain
D
Sushi 2
begin
607
end
668
score
100.0
distance
69.142075
seq distance
510
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
69.142075
seq distance
510
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
75.094986
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
75.094986
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
77.65904
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
77.65904
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
77.72158
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
77.72158
seq distance
False
chain
E
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
78.26197
seq distance
563
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
78.26197
seq distance
563
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
78.29248
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
78.29248
seq distance
False
chain
E
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.36762
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.36762
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.345184
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.345184
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
83.050446
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
83.050446
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
87.32172
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
87.32172
seq distance
False
chain
B
MACPF
begin
324
end
333
score
84.54545454545456
distance
90.544174
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
90.544174
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.45348
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.45348
seq distance
False
chain
G
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
91.83286
seq distance
568
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
91.83286
seq distance
568
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
92.791534
seq distance
100
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
92.791534
seq distance
100
chain
C
Disordered
begin
327
end
328
score
61.36363636363637
distance
95.291214
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
95.291214
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
99.77986
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
99.77986
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
101.03405
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
101.03405
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
110.9516
seq distance
576
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
110.9516
seq distance
576
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
111.00217
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
111.00217
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
112.41388
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
112.41388
seq distance
False
chain
A
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
119.037346
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
119.037346
seq distance
False
chain
I
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
132.53754
seq distance
652
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
132.53754
seq distance
652
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
135.53203
seq distance
101
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
135.53203
seq distance
101
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
142.33076
seq distance
103
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
142.33076
seq distance
103
chain
C
Details
Redox score
75.94
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.03
Half-sphere exposure sum
53
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
103 (Residue 81 in this structure)
Residue number B
119 (Residue 97 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
CCP 2
begin
594
end
671
score
100.0
distance
2.7905076
seq distance
0
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
2.7905076
seq distance
0
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
2.7905076
seq distance
0
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
2.7905076
seq distance
0
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
10.274954
seq distance
9
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
10.274954
seq distance
9
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
10.418671
seq distance
3
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
10.418671
seq distance
3
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
11.400582
seq distance
16
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
11.400582
seq distance
16
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
22.646282
seq distance
14
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
22.646282
seq distance
14
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
39.2037
seq distance
44
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
39.2037
seq distance
44
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
43.931835
seq distance
22
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
43.931835
seq distance
22
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
57.329586
seq distance
510
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
57.329586
seq distance
510
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
59.46395
seq distance
551
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
59.46395
seq distance
551
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
61.325397
seq distance
175
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
61.325397
seq distance
175
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
61.505764
seq distance
82
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
61.505764
seq distance
82
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
65.42318
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
65.42318
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
66.43845
seq distance
98
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
66.43845
seq distance
98
chain
C
Disordered
begin
494
end
516
score
100.0
distance
71.27769
seq distance
93
chain
C
Disordered
begin
494
end
516
score
100.0
distance
71.27769
seq distance
93
chain
C
Disordered
begin
86
end
121
score
100.0
distance
71.90984
seq distance
488
chain
C
Disordered
begin
86
end
121
score
100.0
distance
71.90984
seq distance
488
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
76.12977
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
76.12977
seq distance
False
chain
A
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
77.42046
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
77.42046
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
81.945114
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
81.945114
seq distance
False
chain
B
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
82.15294
seq distance
503
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
82.15294
seq distance
503
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
82.46952
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
82.46952
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
83.3186
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
83.3186
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
84.52267
seq distance
211
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
84.52267
seq distance
211
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
87.82845
seq distance
110
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
87.82845
seq distance
110
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
88.47402
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
88.47402
seq distance
False
chain
B
EGF-like
begin
435
end
465
score
100.0
distance
89.30307
seq distance
144
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
89.30307
seq distance
144
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
89.950554
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
89.950554
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
90.9712
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
90.9712
seq distance
False
chain
D
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
93.81483
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
93.81483
seq distance
False
chain
E
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
98.01118
seq distance
252
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
98.01118
seq distance
252
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
105.93532
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
105.93532
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
109.326
seq distance
242
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
109.326
seq distance
242
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
111.44958
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
111.44958
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
112.41165
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
112.41165
seq distance
False
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
119.25402
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
119.25402
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
120.54797
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
120.54797
seq distance
False
chain
B
Disordered
begin
138
end
138
score
50.0
distance
122.34456
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
122.34456
seq distance
False
chain
F
MACPF
begin
324
end
332
score
83.08080808080808
distance
125.60055
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
125.60055
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
129.58505
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
129.58505
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
130.9455
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
130.9455
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
133.3806
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
133.3806
seq distance
False
chain
E
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
142.82748
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
142.82748
seq distance
False
chain
G
Disordered
begin
197
end
218
score
76.85950413223141
distance
145.37782
seq distance
391
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
145.37782
seq distance
391
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
145.88582
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
145.88582
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.67651
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.67651
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
152.26906
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
152.26906
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
163.43004
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
163.43004
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
166.64944
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
166.64944
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.78912
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.78912
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
171.07954
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
171.07954
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.56728
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.56728
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
185.62485
seq distance
411
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
185.62485
seq distance
411
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.06949
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.06949
seq distance
False
chain
I
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
191.94861
seq distance
409
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
191.94861
seq distance
409
chain
C
Details
Redox score
75.81
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.04
Half-sphere exposure sum
63
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
631 (Residue 609 in this structure)
Residue number B
673 (Residue 651 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.757768
seq distance
0
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.757768
seq distance
0
chain
C
Disordered
begin
86
end
121
score
100.0
distance
2.7696192
seq distance
0
chain
C
Disordered
begin
86
end
121
score
100.0
distance
2.7696192
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
7.5852995
seq distance
15
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
7.5852995
seq distance
15
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
12.3690605
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
12.3690605
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
16.726353
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
16.726353
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
19.601404
seq distance
19
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
19.601404
seq distance
19
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
21.985123
seq distance
11
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
21.985123
seq distance
11
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
26.575136
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
26.575136
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
26.599909
seq distance
436
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
26.599909
seq distance
436
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
29.219593
seq distance
311
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
29.219593
seq distance
311
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
30.311775
seq distance
270
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
30.311775
seq distance
270
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.97331
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.97331
seq distance
False
chain
E
TSP type-1 2
begin
478
end
527
score
100.0
distance
33.362442
seq distance
391
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
33.362442
seq distance
391
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
34.27908
seq distance
348
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
34.27908
seq distance
348
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
40.83274
seq distance
280
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
40.83274
seq distance
280
chain
C
Disordered
begin
494
end
516
score
100.0
distance
44.56726
seq distance
407
chain
C
Disordered
begin
494
end
516
score
100.0
distance
44.56726
seq distance
407
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
44.889854
seq distance
460
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
44.889854
seq distance
460
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
46.445045
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
46.445045
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
47.97177
seq distance
412
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
47.97177
seq distance
412
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
50.430286
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
50.430286
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
50.55626
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
50.55626
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
51.17184
seq distance
478
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
51.17184
seq distance
478
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
51.78504
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
51.78504
seq distance
False
chain
D
CCP 2
begin
594
end
671
score
100.0
distance
52.539528
seq distance
507
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
52.539528
seq distance
507
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
55.22815
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
55.22815
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
55.94605
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
55.94605
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
56.89526
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
56.89526
seq distance
False
chain
B
MACPF
begin
324
end
332
score
83.08080808080808
distance
57.138897
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
57.138897
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
58.59081
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
58.59081
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
62.170357
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
62.170357
seq distance
False
chain
G
Sushi 2
begin
607
end
668
score
100.0
distance
67.18717
seq distance
520
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
67.18717
seq distance
520
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
67.95112
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
67.95112
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.03013
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.03013
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.54721
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.54721
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
75.50647
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
75.50647
seq distance
False
chain
H
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
77.5083
seq distance
573
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
77.5083
seq distance
573
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.69831
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.69831
seq distance
False
chain
A
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.67362
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.67362
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.181526
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.181526
seq distance
False
chain
H
Disordered
begin
197
end
218
score
76.85950413223141
distance
83.9254
seq distance
110
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
83.9254
seq distance
110
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
91.17194
seq distance
578
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
91.17194
seq distance
578
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
91.346886
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
91.346886
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.581696
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.581696
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
92.84802
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
92.84802
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
97.747665
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
97.747665
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
101.7385
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
101.7385
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
103.935646
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
103.935646
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
111.73903
seq distance
586
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
111.73903
seq distance
586
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
113.829384
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
113.829384
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
117.72947
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
117.72947
seq distance
False
chain
A
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
123.758545
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
123.758545
seq distance
False
chain
I
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
126.286705
seq distance
111
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
126.286705
seq distance
111
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
132.95255
seq distance
113
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
132.95255
seq distance
113
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
134.53154
seq distance
662
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
134.53154
seq distance
662
chain
C
Details
Redox score
75.58
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2
Half-sphere exposure sum
77
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
91 (Residue 69 in this structure)
Residue number B
109 (Residue 87 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
TSP type-1 2
begin
478
end
527
score
100.0
distance
2.8009105
seq distance
0
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
2.8009105
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8263528
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8263528
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
7.06739
seq distance
2
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
7.06739
seq distance
2
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
8.934289
seq distance
16
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
8.934289
seq distance
16
chain
C
Disordered
begin
494
end
516
score
100.0
distance
8.934289
seq distance
11
chain
C
Disordered
begin
494
end
516
score
100.0
distance
8.934289
seq distance
11
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
9.613247
seq distance
375
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
9.613247
seq distance
375
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
21.036222
seq distance
40
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
21.036222
seq distance
40
chain
C
Disordered
begin
86
end
121
score
100.0
distance
22.645227
seq distance
312
chain
C
Disordered
begin
86
end
121
score
100.0
distance
22.645227
seq distance
312
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
23.110939
seq distance
35
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
23.110939
seq distance
35
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
25.965015
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
25.965015
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.704733
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.704733
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
32.108353
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
32.108353
seq distance
False
chain
D
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
33.392414
seq distance
76
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
33.392414
seq distance
76
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
35.72263
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
35.72263
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
35.831608
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
35.831608
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
36.854313
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
36.854313
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
37.14384
seq distance
66
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
37.14384
seq distance
66
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.07873
seq distance
334
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.07873
seq distance
334
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
41.40624
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
41.40624
seq distance
False
chain
B
EGF-like
begin
451
end
455
score
54.090909090909086
distance
42.209694
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
42.209694
seq distance
False
chain
D
Sushi 1
begin
547
end
606
score
100.0
distance
46.35771
seq distance
64
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
46.35771
seq distance
64
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.50279
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.50279
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.50279
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.50279
seq distance
False
chain
D
CCP 2
begin
594
end
671
score
100.0
distance
50.842247
seq distance
111
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
50.842247
seq distance
111
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.86071
seq distance
327
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.86071
seq distance
327
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
54.260513
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
54.260513
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
56.92781
seq distance
82
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
56.92781
seq distance
82
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
58.665443
seq distance
215
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
58.665443
seq distance
215
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
65.413536
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
65.413536
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
66.06104
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
66.06104
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
67.44598
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
67.44598
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
70.55032
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
70.55032
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
71.24586
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
71.24586
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
74.795135
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
74.795135
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
75.595406
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
75.595406
seq distance
False
chain
G
Sushi 2
begin
607
end
668
score
100.0
distance
82.17437
seq distance
124
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
82.17437
seq distance
124
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
91.16613
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
91.16613
seq distance
False
chain
H
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
94.13918
seq distance
177
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
94.13918
seq distance
177
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
97.559166
seq distance
235
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
97.559166
seq distance
235
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
97.865364
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
97.865364
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
100.38957
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
100.38957
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
102.247635
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
102.247635
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
103.76941
seq distance
233
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
103.76941
seq distance
233
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
105.53023
seq distance
182
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
105.53023
seq distance
182
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
109.32423
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
109.32423
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
110.71896
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
110.71896
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
115.755875
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
115.755875
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
118.274734
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
118.274734
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
125.11765
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
125.11765
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
127.20719
seq distance
190
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
127.20719
seq distance
190
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
134.18251
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
134.18251
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
140.47978
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
140.47978
seq distance
False
chain
A
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
145.43233
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
145.43233
seq distance
False
chain
I
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
152.90663
seq distance
266
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
152.90663
seq distance
266
chain
C
Details
Redox score
75.51
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.04
Half-sphere exposure sum
60
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
455 (Residue 433 in this structure)
Residue number B
505 (Residue 483 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
19
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
19
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
6
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
77
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
77
chain
A
Details
Redox score
75.45
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
5.7
Half-sphere exposure sum
59
Minimum pKa
nan
% buried
11
Peptide accession
P10643
Residue number A
789
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
19
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
19
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.730682
seq distance
77
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.730682
seq distance
77
chain
A
Details
Redox score
75.41
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
6.05
Half-sphere exposure sum
59
Minimum pKa
nan
% buried
4.5
Peptide accession
P10643
Residue number A
789
Residue number B
791
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.7957861
seq distance
0
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.7957861
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
7.3749647
seq distance
28
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
7.3749647
seq distance
28
chain
C
Disordered
begin
86
end
121
score
100.0
distance
10.578465
seq distance
12
chain
C
Disordered
begin
86
end
121
score
100.0
distance
10.578465
seq distance
12
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
16.078758
seq distance
5
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
16.078758
seq distance
5
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
18.425951
seq distance
449
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
18.425951
seq distance
449
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
19.614918
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
19.614918
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
24.70278
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
24.70278
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
25.211727
seq distance
32
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
25.211727
seq distance
32
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
26.017117
seq distance
404
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
26.017117
seq distance
404
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
29.757437
seq distance
324
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
29.757437
seq distance
324
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
31.64694
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
31.64694
seq distance
False
chain
D
EGF-like
begin
435
end
465
score
100.0
distance
35.781326
seq distance
361
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
35.781326
seq distance
361
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
35.87312
seq distance
473
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
35.87312
seq distance
473
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
36.542946
seq distance
283
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
36.542946
seq distance
283
chain
C
Disordered
begin
494
end
516
score
100.0
distance
38.71365
seq distance
420
chain
C
Disordered
begin
494
end
516
score
100.0
distance
38.71365
seq distance
420
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
40.454666
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
40.454666
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
43.36116
seq distance
520
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
43.36116
seq distance
520
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
43.439095
seq distance
491
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
43.439095
seq distance
491
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
45.584404
seq distance
425
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
45.584404
seq distance
425
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
47.635616
seq distance
293
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
47.635616
seq distance
293
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
49.90706
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
49.90706
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
52.288506
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
52.288506
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
53.5764
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
53.5764
seq distance
False
chain
B
Disordered
begin
510
end
522
score
53.67132867132868
distance
55.014465
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
55.014465
seq distance
False
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
55.887466
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
55.887466
seq distance
False
chain
E
EGF-like
begin
451
end
455
score
54.090909090909086
distance
56.25678
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
56.25678
seq distance
False
chain
D
Sushi 2
begin
607
end
668
score
100.0
distance
58.577534
seq distance
533
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
58.577534
seq distance
533
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
59.38262
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
59.38262
seq distance
False
chain
D
Disordered
begin
138
end
138
score
50.0
distance
65.91763
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
65.91763
seq distance
False
chain
F
MACPF
begin
324
end
332
score
83.08080808080808
distance
66.55663
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
66.55663
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
68.93691
seq distance
586
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
68.93691
seq distance
586
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
69.944115
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
69.944115
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.98067
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.98067
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
72.44719
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
72.44719
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
76.04604
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
76.04604
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
76.92233
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
76.92233
seq distance
False
chain
E
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
82.49403
seq distance
591
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
82.49403
seq distance
591
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
85.33116
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
85.33116
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
85.422295
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
85.422295
seq distance
False
chain
B
Disordered
begin
197
end
218
score
76.85950413223141
distance
88.82862
seq distance
123
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
88.82862
seq distance
123
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
89.87935
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
89.87935
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.56579
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.56579
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
99.76027
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
99.76027
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
102.70779
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
102.70779
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
103.30091
seq distance
599
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
103.30091
seq distance
599
chain
C
Disordered
begin
327
end
328
score
61.36363636363637
distance
107.39517
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
107.39517
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
110.66222
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
110.66222
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.43556
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.43556
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
112.8086
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
112.8086
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
122.721085
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
122.721085
seq distance
False
chain
H
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.49324
seq distance
675
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.49324
seq distance
675
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
131.07967
seq distance
124
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
131.07967
seq distance
124
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.0173
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.0173
seq distance
False
chain
I
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
137.72316
seq distance
126
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
137.72316
seq distance
126
chain
C
Details
Redox score
75.14
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.03
Half-sphere exposure sum
66
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
85 (Residue 63 in this structure)
Residue number B
96 (Residue 74 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.7431734
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.7431734
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
5.986332
seq distance
45
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
5.986332
seq distance
45
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
10.054392
seq distance
466
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
10.054392
seq distance
466
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
11.7832365
seq distance
4
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
11.7832365
seq distance
4
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
20.683119
seq distance
421
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
20.683119
seq distance
421
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.153767
seq distance
29
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.153767
seq distance
29
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.050196
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.050196
seq distance
False
chain
D
EGF-like
begin
435
end
465
score
100.0
distance
27.234606
seq distance
378
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
27.234606
seq distance
378
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
28.246048
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
28.246048
seq distance
False
chain
D
Sushi 1
begin
547
end
606
score
100.0
distance
29.334354
seq distance
490
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
29.334354
seq distance
490
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
30.224298
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
30.224298
seq distance
False
chain
D
Disordered
begin
494
end
516
score
100.0
distance
32.480434
seq distance
437
chain
C
Disordered
begin
494
end
516
score
100.0
distance
32.480434
seq distance
437
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
32.82318
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
32.82318
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
33.324688
seq distance
508
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
33.324688
seq distance
508
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
34.866276
seq distance
341
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
34.866276
seq distance
341
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
36.59041
seq distance
537
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
36.59041
seq distance
537
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
38.808514
seq distance
442
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
38.808514
seq distance
442
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
41.43981
seq distance
49
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
41.43981
seq distance
49
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
42.507023
seq distance
300
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
42.507023
seq distance
300
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
42.6399
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
42.6399
seq distance
False
chain
D
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
44.568832
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
44.568832
seq distance
False
chain
E
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.868824
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.868824
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
48.454334
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
48.454334
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.12728
seq distance
310
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.12728
seq distance
310
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
57.504616
seq distance
550
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
57.504616
seq distance
550
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
58.350548
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
58.350548
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
59.26088
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
59.26088
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
59.410484
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
59.410484
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
67.281494
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
67.281494
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
68.28101
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
68.28101
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
68.30911
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
68.30911
seq distance
False
chain
B
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.712814
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.712814
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.44338
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.44338
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
71.28139
seq distance
603
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
71.28139
seq distance
603
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
78.35411
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
78.35411
seq distance
False
chain
A
Disordered
begin
138
end
138
score
50.0
distance
79.1897
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
79.1897
seq distance
False
chain
F
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
84.594795
seq distance
608
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
84.594795
seq distance
608
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
86.48026
seq distance
140
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
86.48026
seq distance
140
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
89.12244
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
89.12244
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
90.75278
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
90.75278
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.92531
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.92531
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
98.21653
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
98.21653
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.075325
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.075325
seq distance
False
chain
G
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
106.459694
seq distance
616
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
106.459694
seq distance
616
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
108.911804
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
108.911804
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
112.70558
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
112.70558
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.21342
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.21342
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.74327
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.74327
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
119.35502
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
119.35502
seq distance
False
chain
A
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.39899
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.39899
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
126.601295
seq distance
141
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
126.601295
seq distance
141
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
129.73242
seq distance
692
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
129.73242
seq distance
692
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
132.8407
seq distance
143
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
132.8407
seq distance
143
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.60835
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.60835
seq distance
False
chain
I
Details
Redox score
75.12
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
1.99
Half-sphere exposure sum
70
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
42 (Residue 20 in this structure)
Residue number B
79 (Residue 57 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
CCP 1
begin
523
end
593
score
100.0
distance
2.819245
seq distance
0
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
2.819245
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8307612
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8307612
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
5.713682
seq distance
353
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
5.713682
seq distance
353
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
10.901575
seq distance
312
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
10.901575
seq distance
312
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
11.5927725
seq distance
11
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
11.5927725
seq distance
11
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
23.984491
seq distance
9
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
23.984491
seq distance
9
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.207834
seq distance
290
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.207834
seq distance
290
chain
C
Disordered
begin
494
end
516
score
100.0
distance
25.734095
seq distance
22
chain
C
Disordered
begin
494
end
516
score
100.0
distance
25.734095
seq distance
22
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
29.568892
seq distance
24
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
29.568892
seq distance
24
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
29.759138
seq distance
56
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
29.759138
seq distance
56
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.764166
seq distance
13
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.764166
seq distance
13
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
31.148735
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
31.148735
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
31.483936
seq distance
27
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
31.483936
seq distance
27
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
32.678257
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
32.678257
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
35.429802
seq distance
39
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
35.429802
seq distance
39
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
35.593693
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
35.593693
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
38.7446
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
38.7446
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
39.38075
seq distance
305
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
39.38075
seq distance
305
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
41.965195
seq distance
54
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
41.965195
seq distance
54
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
48.521442
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
48.521442
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
49.20853
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
49.20853
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
50.903946
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
50.903946
seq distance
False
chain
B
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
51.56035
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
51.56035
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.699936
seq distance
44
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.699936
seq distance
44
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
53.282734
seq distance
69
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
53.282734
seq distance
69
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
53.68366
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
53.68366
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
54.09368
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
54.09368
seq distance
False
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
62.62345
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
62.62345
seq distance
False
chain
E
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
65.87486
seq distance
122
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
65.87486
seq distance
122
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
66.39899
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
66.39899
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
67.447685
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
67.447685
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
73.77445
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
73.77445
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
76.079124
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
76.079124
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
76.99187
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
76.99187
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
77.34416
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
77.34416
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
77.678276
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
77.678276
seq distance
False
chain
F
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
78.63366
seq distance
127
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
78.63366
seq distance
127
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
87.189514
seq distance
193
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
87.189514
seq distance
193
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
88.50542
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
88.50542
seq distance
False
chain
B
MACPF
begin
324
end
332
score
83.08080808080808
distance
94.63057
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
94.63057
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
98.26914
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
98.26914
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
100.112785
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
100.112785
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
100.52227
seq distance
135
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
100.52227
seq distance
135
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
107.73045
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
107.73045
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
113.24078
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
113.24078
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
113.53706
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
113.53706
seq distance
False
chain
A
Disordered
begin
327
end
328
score
61.36363636363637
distance
117.87434
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
117.87434
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
121.476776
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
121.476776
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
123.15703
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
123.15703
seq distance
False
chain
H
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
124.94001
seq distance
211
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
124.94001
seq distance
211
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.91915
seq distance
213
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.91915
seq distance
213
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.88684
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.88684
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.30167
seq distance
211
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.30167
seq distance
211
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
144.83266
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
144.83266
seq distance
False
chain
I
Details
Redox score
75.02
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
2.04
Half-sphere exposure sum
79
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
433 (Residue 411 in this structure)
Residue number B
560 (Residue 538 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
12
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
12
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
15.969687
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
15.969687
seq distance
6
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.730682
seq distance
70
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.730682
seq distance
70
chain
A
Details
Redox score
74.93
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
6.7
Half-sphere exposure sum
48
Minimum pKa
nan
% buried
1
Peptide accession
P10643
Residue number A
782
Residue number B
789
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.840693
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
3
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
15.969687
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
15.969687
seq distance
6
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.730682
seq distance
61
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.730682
seq distance
61
chain
A
Details
Redox score
74.73
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
7
Half-sphere exposure sum
45
Minimum pKa
nan
% buried
1
Peptide accession
P10643
Residue number A
773
Residue number B
789
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.7865968
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.7865968
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
7.3639283
seq distance
395
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
7.3639283
seq distance
395
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
9.421162
seq distance
19
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
9.421162
seq distance
19
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
12.812489
seq distance
14
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
12.812489
seq distance
14
chain
C
Disordered
begin
494
end
516
score
100.0
distance
13.641172
seq distance
30
chain
C
Disordered
begin
494
end
516
score
100.0
distance
13.641172
seq distance
30
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
20.252222
seq distance
35
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
20.252222
seq distance
35
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
22.987291
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
22.987291
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
24.674238
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
24.674238
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
25.228344
seq distance
332
chain
C
Disordered
begin
86
end
121
score
100.0
distance
25.228344
seq distance
332
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
25.250935
seq distance
86
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
25.250935
seq distance
86
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
26.3162
seq distance
55
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
26.3162
seq distance
55
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
26.516417
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
26.516417
seq distance
False
chain
B
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
27.351627
seq distance
96
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
27.351627
seq distance
96
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.200748
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.200748
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
33.267887
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
33.267887
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
34.58265
seq distance
59
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
34.58265
seq distance
59
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
35.292625
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
35.292625
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
38.554276
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
38.554276
seq distance
False
chain
B
LDL-receptor class A
begin
61
end
99
score
100.0
distance
41.13251
seq distance
354
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
41.13251
seq distance
354
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
42.34305
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
42.34305
seq distance
False
chain
E
Disordered
begin
197
end
218
score
76.85950413223141
distance
42.52512
seq distance
235
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
42.52512
seq distance
235
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
47.64668
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
47.64668
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.314472
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.314472
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.314472
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.314472
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.91789
seq distance
347
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.91789
seq distance
347
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
55.901302
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
55.901302
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
58.717113
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
58.717113
seq distance
False
chain
E
Sushi 1
begin
547
end
606
score
100.0
distance
59.2692
seq distance
83
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
59.2692
seq distance
83
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
60.69447
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
60.69447
seq distance
False
chain
G
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
63.253056
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
63.253056
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
64.31587
seq distance
130
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
64.31587
seq distance
130
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.301315
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.301315
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
66.86905
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
66.86905
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
69.01386
seq distance
101
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
69.01386
seq distance
101
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
79.25769
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
79.25769
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
80.86495
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
80.86495
seq distance
False
chain
A
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
82.96533
seq distance
255
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
82.96533
seq distance
255
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
86.71347
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
86.71347
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
89.44061
seq distance
253
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
89.44061
seq distance
253
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
94.3448
seq distance
143
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
94.3448
seq distance
143
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.59337
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.59337
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
96.6582
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
96.6582
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.48932
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.48932
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
103.776306
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
103.776306
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.81182
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.81182
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
106.32672
seq distance
196
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
106.32672
seq distance
196
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
108.85139
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
108.85139
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
115.09997
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
115.09997
seq distance
False
chain
H
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
118.130806
seq distance
201
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
118.130806
seq distance
201
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
123.72899
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
123.72899
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.05775
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.05775
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
139.7736
seq distance
209
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
139.7736
seq distance
209
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
151.39392
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
151.39392
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
165.26796
seq distance
285
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
165.26796
seq distance
285
chain
C
Details
Redox score
72.98
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
4.32
Half-sphere exposure sum
62
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
475 (Residue 453 in this structure)
Residue number B
486 (Residue 464 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8466582
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8466582
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
6
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
19
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
19
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
64
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
64
chain
A
Details
Redox score
72.62
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
7.52
Half-sphere exposure sum
61
Minimum pKa
nan
% buried
11.5
Peptide accession
P10643
Residue number A
776
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.818704
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.818704
seq distance
0
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
4.9483523
seq distance
1
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
4.9483523
seq distance
1
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
12.729168
seq distance
21
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
12.729168
seq distance
21
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
26.659138
seq distance
45
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
26.659138
seq distance
45
chain
A
Details
Redox score
72.47
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
8.03
Half-sphere exposure sum
40
Minimum pKa
nan
% buried
4.5
Peptide accession
P10643
Residue number A
713
Residue number B
750
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8496232
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8496232
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
12
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
12
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
13
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
13
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
70
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
70
chain
A
Details
Redox score
72.43
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
7.53
Half-sphere exposure sum
55
Minimum pKa
nan
% buried
10
Peptide accession
P10643
Residue number A
782
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
6
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
6
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
64
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
36.41227
seq distance
64
chain
A
Details
Redox score
72.29
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
8.05
Half-sphere exposure sum
61
Minimum pKa
nan
% buried
5
Peptide accession
P10643
Residue number A
776
Residue number B
791
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
3
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
37.294395
seq distance
61
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
37.294395
seq distance
61
chain
A
Details
Redox score
71.64
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
8.53
Half-sphere exposure sum
52
Minimum pKa
nan
% buried
3.5
Peptide accession
P10643
Residue number A
773
Residue number B
791
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8517427
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8517427
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
3
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
22
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
14.100631
seq distance
22
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
61
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
35.82945
seq distance
61
chain
A
Details
Redox score
71.03
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
8.57
Half-sphere exposure sum
52
Minimum pKa
nan
% buried
10
Peptide accession
P10643
Residue number A
773
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
457
end
487
score
100.0
distance
2.8088515
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8088515
seq distance
0
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
8.904277
seq distance
380
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
8.904277
seq distance
380
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
9.220186
seq distance
4
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
9.220186
seq distance
4
chain
D
Disordered
begin
516
end
538
score
100.0
distance
10.9926405
seq distance
30
chain
D
Disordered
begin
516
end
538
score
100.0
distance
10.9926405
seq distance
30
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
10.9926405
seq distance
14
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
10.9926405
seq distance
14
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
19.722815
seq distance
35
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
19.722815
seq distance
35
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
23.49186
seq distance
71
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
23.49186
seq distance
71
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
24.797327
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
24.797327
seq distance
False
chain
C
Disordered
begin
41
end
41
score
70.45454545454545
distance
26.508217
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
26.508217
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
26.759352
seq distance
40
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
26.759352
seq distance
40
chain
D
Disordered
begin
108
end
143
score
100.0
distance
27.03489
seq distance
317
chain
D
Disordered
begin
108
end
143
score
100.0
distance
27.03489
seq distance
317
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.6049
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.6049
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
34.71138
seq distance
59
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
34.71138
seq distance
59
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
36.977745
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
36.977745
seq distance
False
chain
C
Disordered
begin
219
end
240
score
100.0
distance
41.709736
seq distance
220
chain
D
Disordered
begin
219
end
240
score
100.0
distance
41.709736
seq distance
220
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
43.50405
seq distance
339
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
43.50405
seq distance
339
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
43.660423
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
43.660423
seq distance
False
chain
F
Disordered
begin
585
end
589
score
50.90909090909091
distance
47.20918
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
47.20918
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
49.099102
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
49.099102
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
51.716393
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
51.716393
seq distance
False
chain
X
Disordered
begin
91
end
92
score
68.18181818181817
distance
52.422165
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
52.422165
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
52.422165
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
52.422165
seq distance
False
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.70358
seq distance
332
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.70358
seq distance
332
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
56.98538
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
56.98538
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
57.919403
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
57.919403
seq distance
False
chain
X
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
63.50192
seq distance
86
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
63.50192
seq distance
86
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
64.41563
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
64.41563
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
64.92532
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
64.92532
seq distance
False
chain
G
CCP 2
begin
616
end
691
score
99.2822966507177
distance
65.43076
seq distance
130
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
65.43076
seq distance
130
chain
D
Disordered
begin
138
end
138
score
50.0
distance
66.64205
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
66.64205
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.82075
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.82075
seq distance
False
chain
X
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
71.31676
seq distance
101
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
71.31676
seq distance
101
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
75.186676
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
75.186676
seq distance
False
chain
F
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
80.47969
seq distance
240
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
80.47969
seq distance
240
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
80.78582
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
80.78582
seq distance
False
chain
W
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
83.03419
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
83.03419
seq distance
False
chain
A
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
85.213684
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
85.213684
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
85.50705
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
85.50705
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
86.38679
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
86.38679
seq distance
False
chain
X
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
86.92716
seq distance
238
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
86.92716
seq distance
238
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.02185
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.02185
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.23817
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.23817
seq distance
False
chain
G
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
96.03488
seq distance
143
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
96.03488
seq distance
143
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.49248
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.49248
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
99.01552
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
99.01552
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
101.76508
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
101.76508
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.30265
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.30265
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
107.926834
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
107.926834
seq distance
False
chain
V
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
109.28099
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
109.28099
seq distance
False
chain
B
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
109.41801
seq distance
196
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
109.41801
seq distance
196
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
110.755844
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
110.755844
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
111.029625
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
111.029625
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
112.16155
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
112.16155
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
113.4517
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
113.4517
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.95964
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.95964
seq distance
False
chain
P
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
118.582405
seq distance
201
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
118.582405
seq distance
201
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
123.07295
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
123.07295
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
123.432396
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
123.432396
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.342964
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.342964
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
127.89072
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
127.89072
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.9648
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.9648
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.42653
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.42653
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.24835
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.24835
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.7111
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.7111
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.88968
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.88968
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
139.54065
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
139.54065
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
140.9635
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
140.9635
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
143.2638
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
143.2638
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
146.96448
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
146.96448
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
150.702
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
150.702
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
151.6315
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
151.6315
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.01833
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.01833
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.93266
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.93266
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.21483
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.21483
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
153.78725
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
153.78725
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
159.76741
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
159.76741
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.37991
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.37991
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.97946
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.97946
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
161.3973
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
161.3973
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.14816
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.14816
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.21608
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.21608
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.65924
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.65924
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.66588
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.66588
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.23996
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.23996
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.37178
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.37178
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.61467
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.61467
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.71907
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.71907
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
171.8864
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
171.8864
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.01843
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.01843
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.44034
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.44034
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.29077
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.29077
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
176.59512
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
176.59512
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.04086
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.04086
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.74564
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.74564
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
180.01778
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
180.01778
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
182.31877
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
182.31877
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.39362
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.39362
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.68115
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.68115
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
189.7163
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
189.7163
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.54909
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.54909
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.81862
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.81862
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.90211
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.90211
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
197.13205
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
197.13205
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.25119
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.25119
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
199.07649
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
199.07649
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.8534
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.8534
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
204.775
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
204.775
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
206.38806
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
206.38806
seq distance
False
chain
N
Details
Redox score
70.7
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
5.83
Half-sphere exposure sum
58
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
460
Residue number B
486
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
4.9483523
seq distance
1
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
4.9483523
seq distance
1
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
14.044354
seq distance
56
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
14.044354
seq distance
56
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
26.659138
seq distance
80
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
26.659138
seq distance
80
chain
A
Details
Redox score
70.49
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.48
Half-sphere exposure sum
45
Minimum pKa
nan
% buried
1
Peptide accession
P10643
Residue number A
713
Residue number B
715
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
5.8846464
seq distance
3
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
5.8846464
seq distance
3
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
14.044354
seq distance
56
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
14.044354
seq distance
56
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
25.312286
seq distance
80
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
25.312286
seq distance
80
chain
A
Details
Redox score
70.37
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.73
Half-sphere exposure sum
43
Minimum pKa
nan
% buried
1
Peptide accession
P10643
Residue number A
702
Residue number B
715
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
21
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
21
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
79
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
79
chain
A
Details
Redox score
70.25
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.06
Half-sphere exposure sum
59
Minimum pKa
nan
% buried
8.5
Peptide accession
P10643
Residue number A
791
Residue number B
797
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8335195
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8335195
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
19
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
7.1713576
seq distance
19
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
77
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
77
chain
A
Details
Redox score
70.25
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.43
Half-sphere exposure sum
52
Minimum pKa
nan
% buried
6
Peptide accession
P10643
Residue number A
789
Residue number B
797
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8040588
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8040588
seq distance
0
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
5.8846464
seq distance
10
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
5.8846464
seq distance
10
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
12.729168
seq distance
21
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
12.729168
seq distance
21
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
25.312286
seq distance
45
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
25.312286
seq distance
45
chain
A
Details
Redox score
70.25
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.56
Half-sphere exposure sum
38
Minimum pKa
nan
% buried
4.5
Peptide accession
P10643
Residue number A
702
Residue number B
750
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.8385603
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.8385603
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
8.560025
seq distance
4
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
8.560025
seq distance
4
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
8.988335
seq distance
380
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
8.988335
seq distance
380
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.994443
seq distance
23
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.994443
seq distance
23
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.512271
seq distance
39
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.512271
seq distance
39
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
18.895031
seq distance
44
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
18.895031
seq distance
44
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
23.55115
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
23.55115
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
23.56202
seq distance
71
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
23.56202
seq distance
71
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
23.870605
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
23.870605
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
24.973307
seq distance
317
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.973307
seq distance
317
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
25.221754
seq distance
40
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
25.221754
seq distance
40
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
26.064802
seq distance
81
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
26.064802
seq distance
81
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
27.409761
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
27.409761
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.514221
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.514221
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.284504
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.284504
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
33.611668
seq distance
68
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
33.611668
seq distance
68
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
36.497147
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
36.497147
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
40.31713
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
40.31713
seq distance
False
chain
E
LDL-receptor class A
begin
61
end
99
score
100.0
distance
41.211086
seq distance
339
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
41.211086
seq distance
339
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
42.209843
seq distance
220
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
42.209843
seq distance
220
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.74333
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
50.74333
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.74333
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
50.74333
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.509483
seq distance
332
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.509483
seq distance
332
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
54.34755
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
54.34755
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
57.327408
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
57.327408
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
58.654095
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
58.654095
seq distance
False
chain
G
Sushi 1
begin
547
end
606
score
100.0
distance
58.905155
seq distance
92
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
58.905155
seq distance
92
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.59034
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.59034
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
63.6405
seq distance
139
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
63.6405
seq distance
139
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
64.367676
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
64.367676
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
65.51665
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
65.51665
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
68.907555
seq distance
110
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
68.907555
seq distance
110
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
77.202324
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
77.202324
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.03622
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.03622
seq distance
False
chain
A
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
82.922615
seq distance
240
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
82.922615
seq distance
240
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
84.686005
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
84.686005
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
89.42008
seq distance
238
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
89.42008
seq distance
238
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.6928
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.6928
seq distance
False
chain
G
Sushi 2
begin
607
end
668
score
100.0
distance
93.87035
seq distance
152
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
93.87035
seq distance
152
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
94.624756
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
94.624756
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.58966
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.58966
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
101.72301
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
101.72301
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.76574
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.76574
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
105.6437
seq distance
205
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
105.6437
seq distance
205
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.244446
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.244446
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.07258
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
113.07258
seq distance
False
chain
H
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
117.33873
seq distance
210
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
117.33873
seq distance
210
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.701706
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.701706
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
132.0021
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
132.0021
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
138.9169
seq distance
218
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
138.9169
seq distance
218
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
150.4625
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
150.4625
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
164.5149
seq distance
294
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
164.5149
seq distance
294
chain
C
Details
Redox score
70.21
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
6.01
Half-sphere exposure sum
63
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
460 (Residue 438 in this structure)
Residue number B
477 (Residue 455 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.789243
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.789243
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.602017
seq distance
21
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.602017
seq distance
21
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
12.581762
seq distance
9
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
12.581762
seq distance
9
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.0101
seq distance
45
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.0101
seq distance
45
chain
A
Details
Redox score
69.94
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.33
Half-sphere exposure sum
50
Minimum pKa
nan
% buried
13
Peptide accession
P10643
Residue number A
721
Residue number B
750
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.78732
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.78732
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
21
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
21
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.9612045
seq distance
4
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.9612045
seq distance
4
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
25.152733
seq distance
79
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
25.152733
seq distance
79
chain
A
Details
Redox score
69.7
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
8.59
Half-sphere exposure sum
69
Minimum pKa
nan
% buried
12.5
Peptide accession
P10643
Residue number A
791
Residue number B
818
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8101158
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.8101158
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.107202
seq distance
21
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.107202
seq distance
21
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
12.581762
seq distance
31
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
12.581762
seq distance
31
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.449831
seq distance
45
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.449831
seq distance
45
chain
A
Details
Redox score
69.68
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
8.53
Half-sphere exposure sum
58
Minimum pKa
nan
% buried
17.5
Peptide accession
P10643
Residue number A
743
Residue number B
750
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8335195
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8335195
seq distance
0
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
8.648576
seq distance
6
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
8.648576
seq distance
6
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
64
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
64
chain
A
Details
Redox score
69.68
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.87
Half-sphere exposure sum
54
Minimum pKa
nan
% buried
6.5
Peptide accession
P10643
Residue number A
776
Residue number B
797
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.7983186
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
12
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
5.129116
seq distance
12
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
13.731085
seq distance
4
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
37.294395
seq distance
70
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
37.294395
seq distance
70
chain
A
Details
Redox score
69.63
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.57
Half-sphere exposure sum
55
Minimum pKa
nan
% buried
3.5
Peptide accession
P10643
Residue number A
782
Residue number B
791
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.789243
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.789243
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.602017
seq distance
50
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.602017
seq distance
50
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
10.76358
seq distance
3
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
10.76358
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.0101
seq distance
74
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.0101
seq distance
74
chain
A
Details
Redox score
69.26
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.98
Half-sphere exposure sum
55
Minimum pKa
nan
% buried
9.5
Peptide accession
P10643
Residue number A
715
Residue number B
721
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
457
end
487
score
100.0
distance
2.8052964
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8052964
seq distance
0
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
7.4997187
seq distance
395
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
7.4997187
seq distance
395
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
10.343865
seq distance
19
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
10.343865
seq distance
19
chain
D
Disordered
begin
516
end
538
score
100.0
distance
12.500476
seq distance
39
chain
D
Disordered
begin
516
end
538
score
100.0
distance
12.500476
seq distance
39
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
12.500476
seq distance
23
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
12.500476
seq distance
23
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
21.375362
seq distance
44
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
21.375362
seq distance
44
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
21.948374
seq distance
86
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
21.948374
seq distance
86
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
23.95964
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
23.95964
seq distance
False
chain
C
Disordered
begin
108
end
143
score
100.0
distance
27.53081
seq distance
332
chain
D
Disordered
begin
108
end
143
score
100.0
distance
27.53081
seq distance
332
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
27.953527
seq distance
55
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
27.953527
seq distance
55
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.24333
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.24333
seq distance
False
chain
B
EGF-like
begin
451
end
455
score
54.090909090909086
distance
31.146608
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
31.146608
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
35.82827
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
35.82827
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
35.996113
seq distance
68
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
35.996113
seq distance
68
chain
D
Disordered
begin
219
end
240
score
100.0
distance
40.770786
seq distance
235
chain
D
Disordered
begin
219
end
240
score
100.0
distance
40.770786
seq distance
235
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
41.8351
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
41.8351
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
121
score
100.0
distance
43.61735
seq distance
354
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
43.61735
seq distance
354
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
49.152287
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
49.152287
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
51.042152
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
51.042152
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
51.865253
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
51.865253
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
51.865253
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
51.865253
seq distance
False
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
53.69706
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
53.69706
seq distance
False
chain
X
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.3486
seq distance
347
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.3486
seq distance
347
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
55.371494
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
55.371494
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
59.948494
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
59.948494
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
63.160133
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
63.160133
seq distance
False
chain
G
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
63.28307
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
63.28307
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
64.44021
seq distance
95
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
64.44021
seq distance
95
chain
D
Disordered
begin
138
end
138
score
50.0
distance
65.61279
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
65.61279
seq distance
False
chain
E
CCP 2
begin
616
end
691
score
99.2822966507177
distance
66.38348
seq distance
139
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
66.38348
seq distance
139
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.75401
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.75401
seq distance
False
chain
X
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
71.84133
seq distance
110
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
71.84133
seq distance
110
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
73.68488
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
73.68488
seq distance
False
chain
F
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
79.783936
seq distance
255
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
79.783936
seq distance
255
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
82.80142
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
82.80142
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
83.58747
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
83.58747
seq distance
False
chain
P
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
84.958115
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
84.958115
seq distance
False
chain
A
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
86.24367
seq distance
253
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
86.24367
seq distance
253
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
86.35721
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
86.35721
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
87.20008
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
87.20008
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
91.569824
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
91.569824
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.72352
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.72352
seq distance
False
chain
W
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
96.823654
seq distance
152
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
96.823654
seq distance
152
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.35039
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.35039
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.64695
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
97.64695
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.063194
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.063194
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.31336
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
103.31336
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
109.78786
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
109.78786
seq distance
False
chain
V
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
110.416534
seq distance
205
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
110.416534
seq distance
205
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
111.02775
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
111.02775
seq distance
False
chain
B
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
111.20231
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
111.20231
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
111.70723
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
111.70723
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
111.923
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
111.923
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
112.09296
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
112.09296
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
112.60417
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
112.60417
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
119.66516
seq distance
210
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
119.66516
seq distance
210
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.176605
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
121.176605
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
121.43378
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
121.43378
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.42426
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
125.42426
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
126.12049
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
126.12049
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
131.13248
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
131.13248
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
131.7514
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
131.7514
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
133.18715
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
133.18715
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.82254
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.82254
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
137.58165
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
137.58165
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.82419
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.82419
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.2198
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.2198
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
141.27895
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
141.27895
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
146.84807
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
146.84807
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
149.6571
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
149.6571
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
150.34532
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
150.34532
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
150.45384
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
150.45384
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
151.33919
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
151.33919
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
153.17403
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
153.17403
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
154.19537
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
154.19537
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
159.36841
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
159.36841
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
159.40439
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
159.40439
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.43373
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.43373
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.92537
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
159.92537
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
162.39558
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
162.39558
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
165.28935
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
165.28935
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.25464
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.25464
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.98953
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.98953
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
168.5648
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
168.5648
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.28444
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
169.28444
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.42484
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.42484
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
170.46696
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
170.46696
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
170.74219
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
170.74219
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
171.94655
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
171.94655
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.36806
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.36806
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
174.35258
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
174.35258
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.10475
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.10475
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.19305
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.19305
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
176.56384
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
176.56384
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
178.19275
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
178.19275
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
181.91072
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
181.91072
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.11409
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.11409
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
187.8937
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
187.8937
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.00471
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.00471
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
190.83475
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
190.83475
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.33286
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.33286
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.90302
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
195.90302
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
196.52698
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
196.52698
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.9929
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.9929
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
197.4156
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
197.4156
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
202.94403
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
202.94403
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.31796
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.31796
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.20012
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.20012
seq distance
False
chain
N
Details
Redox score
68.83
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
6.92
Half-sphere exposure sum
56
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
475
Residue number B
477
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8335195
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.8335195
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
27
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
27
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.4242826
seq distance
2
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
85
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
24.678598
seq distance
85
chain
A
Details
Redox score
68.75
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.65
Half-sphere exposure sum
59
Minimum pKa
nan
% buried
15
Peptide accession
P10643
Residue number A
797
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
2.790966
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.107202
seq distance
28
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
8.107202
seq distance
28
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
10.76358
seq distance
3
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
10.76358
seq distance
3
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.449831
seq distance
52
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
21.449831
seq distance
52
chain
A
Details
Redox score
68.34
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.59
Half-sphere exposure sum
63
Minimum pKa
nan
% buried
14
Peptide accession
P10643
Residue number A
715
Residue number B
743
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.7865968
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.7865968
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.419828
seq distance
1
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.419828
seq distance
1
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
6.9549074
seq distance
377
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
6.9549074
seq distance
377
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
9.81254
seq distance
25
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
9.81254
seq distance
25
chain
C
Disordered
begin
494
end
516
score
100.0
distance
11.901647
seq distance
41
chain
C
Disordered
begin
494
end
516
score
100.0
distance
11.901647
seq distance
41
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
15.656078
seq distance
46
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
15.656078
seq distance
46
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.68009
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.68009
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
22.719585
seq distance
314
chain
C
Disordered
begin
86
end
121
score
100.0
distance
22.719585
seq distance
314
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
24.870333
seq distance
37
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
24.870333
seq distance
37
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.59978
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.59978
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.711212
seq distance
68
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.711212
seq distance
68
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.200748
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
28.200748
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
28.226913
seq distance
70
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
28.226913
seq distance
70
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.33525
seq distance
78
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.33525
seq distance
78
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
29.757685
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
29.757685
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.706549
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.706549
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
33.267887
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
33.267887
seq distance
False
chain
D
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.549587
seq distance
336
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.549587
seq distance
336
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
39.449135
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
39.449135
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
44.19972
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
44.19972
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
46.435677
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
46.435677
seq distance
False
chain
B
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.498783
seq distance
217
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.498783
seq distance
217
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.389465
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.389465
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.389465
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.389465
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.89676
seq distance
329
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.89676
seq distance
329
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.27577
seq distance
94
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.27577
seq distance
94
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
56.235794
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
56.235794
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
57.477924
seq distance
141
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
57.477924
seq distance
141
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
58.717113
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
58.717113
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
61.845478
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
61.845478
seq distance
False
chain
G
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.0706
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.0706
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
62.07445
seq distance
112
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
62.07445
seq distance
112
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.73213
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.73213
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
69.081314
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
69.081314
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
77.478745
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
77.478745
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
80.95107
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
80.95107
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.384026
seq distance
237
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.384026
seq distance
237
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
87.77458
seq distance
154
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
87.77458
seq distance
154
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.9256
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.9256
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
92.76738
seq distance
235
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
92.76738
seq distance
235
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.67331
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.67331
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
98.779335
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
98.779335
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.07353
seq distance
207
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.07353
seq distance
207
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.68166
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.68166
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
105.52416
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
105.52416
seq distance
False
chain
I
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
106.06868
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
106.06868
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
107.663895
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
107.663895
seq distance
False
chain
I
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.8388
seq distance
212
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.8388
seq distance
212
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.07677
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.07677
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.80659
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.80659
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.60039
seq distance
220
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.60039
seq distance
220
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.69887
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.69887
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
146.21225
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
146.21225
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.04236
seq distance
296
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.04236
seq distance
296
chain
C
Details
Redox score
68.32
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
7.11
Half-sphere exposure sum
71
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
457 (Residue 435 in this structure)
Residue number B
475 (Residue 453 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.8475137
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.8475137
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.419828
seq distance
1
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
4.419828
seq distance
1
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
6.9549074
seq distance
377
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
6.9549074
seq distance
377
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
9.81254
seq distance
40
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
9.81254
seq distance
40
chain
C
Disordered
begin
494
end
516
score
100.0
distance
11.901647
seq distance
56
chain
C
Disordered
begin
494
end
516
score
100.0
distance
11.901647
seq distance
56
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
15.656078
seq distance
61
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
15.656078
seq distance
61
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.68009
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.68009
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
22.719585
seq distance
314
chain
C
Disordered
begin
86
end
121
score
100.0
distance
22.719585
seq distance
314
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
24.870333
seq distance
37
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
24.870333
seq distance
37
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
27.145147
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
27.145147
seq distance
False
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.91972
seq distance
68
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.91972
seq distance
68
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.197184
seq distance
78
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.197184
seq distance
78
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
28.226913
seq distance
85
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
28.226913
seq distance
85
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
28.586592
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
28.586592
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
29.738043
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
29.738043
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.706549
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.706549
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
35.28667
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
35.28667
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.549587
seq distance
336
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.549587
seq distance
336
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
45.165287
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
45.165287
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.596878
seq distance
217
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.596878
seq distance
217
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.389465
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.389465
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.389465
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.389465
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.89676
seq distance
329
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
50.89676
seq distance
329
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.27577
seq distance
109
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.27577
seq distance
109
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
57.477924
seq distance
156
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
57.477924
seq distance
156
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
58.197758
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
58.197758
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
60.71216
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
60.71216
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.0706
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
62.0706
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
62.07445
seq distance
127
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
62.07445
seq distance
127
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
63.22599
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
63.22599
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.39042
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.39042
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
68.77994
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
68.77994
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
77.478745
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
77.478745
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
82.19877
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
82.19877
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.61567
seq distance
237
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.61567
seq distance
237
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
87.77458
seq distance
169
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
87.77458
seq distance
169
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.42111
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.42111
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
93.033485
seq distance
235
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
93.033485
seq distance
235
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
96.3136
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
96.3136
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
99.864075
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
99.864075
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.07353
seq distance
222
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.07353
seq distance
222
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.383736
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
104.383736
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
106.06868
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
106.06868
seq distance
False
chain
B
Disordered
begin
327
end
328
score
61.36363636363637
distance
106.77992
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
106.77992
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.9472
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.9472
seq distance
False
chain
I
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.8388
seq distance
227
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.8388
seq distance
227
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.54856
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.54856
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.3035
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.3035
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.60039
seq distance
235
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.60039
seq distance
235
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.93285
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.93285
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
146.21225
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
146.21225
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.04236
seq distance
311
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.04236
seq distance
311
chain
C
Details
Redox score
67.88
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
7.13
Half-sphere exposure sum
75
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
457 (Residue 435 in this structure)
Residue number B
460 (Residue 438 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
457
end
487
score
100.0
distance
2.8101344
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8101344
seq distance
0
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
4.9242854
seq distance
393
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
4.9242854
seq distance
393
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
6.283733
seq distance
17
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
6.283733
seq distance
17
chain
D
Disordered
begin
516
end
538
score
100.0
distance
12.500476
seq distance
41
chain
D
Disordered
begin
516
end
538
score
100.0
distance
12.500476
seq distance
41
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
12.500476
seq distance
25
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
12.500476
seq distance
25
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
18.81662
seq distance
46
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
18.81662
seq distance
46
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.075468
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.075468
seq distance
False
chain
C
Disordered
begin
108
end
143
score
100.0
distance
25.213755
seq distance
330
chain
D
Disordered
begin
108
end
143
score
100.0
distance
25.213755
seq distance
330
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
27.594952
seq distance
53
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
27.594952
seq distance
53
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
27.68171
seq distance
84
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
27.68171
seq distance
84
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.316162
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.316162
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.151415
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.151415
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
31.036415
seq distance
70
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
31.036415
seq distance
70
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.852055
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.852055
seq distance
False
chain
C
LDL-receptor class A
begin
83
end
121
score
100.0
distance
40.49788
seq distance
352
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
40.49788
seq distance
352
chain
D
Disordered
begin
219
end
240
score
100.0
distance
46.091713
seq distance
233
chain
D
Disordered
begin
219
end
240
score
100.0
distance
46.091713
seq distance
233
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
46.90885
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
46.90885
seq distance
False
chain
F
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.76474
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.76474
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.76474
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.76474
seq distance
False
chain
C
Disordered
begin
585
end
589
score
50.90909090909091
distance
49.152287
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
49.152287
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
51.042152
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
51.042152
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
53.69706
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
53.69706
seq distance
False
chain
X
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.598724
seq distance
345
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.598724
seq distance
345
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
57.900505
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
57.900505
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
58.216953
seq distance
97
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
58.216953
seq distance
97
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
59.948494
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
59.948494
seq distance
False
chain
X
CCP 2
begin
616
end
691
score
99.2822966507177
distance
60.219807
seq distance
141
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
60.219807
seq distance
141
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
60.72509
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
60.72509
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
64.963295
seq distance
112
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
64.963295
seq distance
112
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.396835
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.396835
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
69.70275
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
69.70275
seq distance
False
chain
X
Disordered
begin
138
end
138
score
50.0
distance
70.35145
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
70.35145
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
74.43596
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
74.43596
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
82.80142
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
82.80142
seq distance
False
chain
W
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
83.524956
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
83.524956
seq distance
False
chain
A
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
83.83289
seq distance
253
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
83.83289
seq distance
253
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
87.20008
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
87.20008
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.85294
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
87.85294
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
89.81318
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
89.81318
seq distance
False
chain
X
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
90.17525
seq distance
251
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
90.17525
seq distance
251
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
90.64483
seq distance
154
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
90.64483
seq distance
154
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.39317
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.39317
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.713486
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.713486
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
100.94385
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
100.94385
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.5465
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.5465
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
102.86066
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
102.86066
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
104.655426
seq distance
207
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
104.655426
seq distance
207
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.36057
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.36057
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
109.589966
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
109.589966
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
109.87459
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
109.87459
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
112.63923
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
112.63923
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
114.069374
seq distance
212
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
114.069374
seq distance
212
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
114.65107
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
114.65107
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
115.055046
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
115.055046
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
115.95706
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
115.95706
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
117.676605
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
117.676605
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
125.15567
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
125.15567
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
127.07321
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
127.07321
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
129.23286
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
129.23286
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
132.47375
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
132.47375
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
134.36237
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
134.36237
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
134.50937
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
134.50937
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.64735
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
135.64735
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.55661
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.55661
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
143.07529
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
143.07529
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
143.6534
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
143.6534
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.8514
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
145.8514
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.21605
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
146.21605
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.82317
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.82317
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
155.14987
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
155.14987
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
155.18616
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
155.18616
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
156.00981
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
156.00981
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
156.6341
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
156.6341
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
157.1368
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
157.1368
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.69809
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.69809
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.0213
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
164.0213
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
165.03442
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
165.03442
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.14809
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.14809
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.26163
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
166.26163
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
168.89836
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
168.89836
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
171.26076
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
171.26076
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.6729
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.6729
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
173.02002
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
173.02002
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.03278
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.03278
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.81189
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.81189
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.37715
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.37715
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.81026
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.81026
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
176.93295
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
176.93295
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
177.09857
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
177.09857
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.76256
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.76256
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
180.09323
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
180.09323
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
181.20735
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
181.20735
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.57281
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.57281
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.68483
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.68483
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
184.4517
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
184.4517
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
186.43333
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
186.43333
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
190.41527
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
190.41527
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
194.26834
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
194.26834
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.37296
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
194.37296
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.01787
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.01787
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
200.6399
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
200.6399
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.56561
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.56561
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
201.60886
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
201.60886
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
203.07744
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
203.07744
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.87259
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.87259
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.57692
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.57692
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
209.67998
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
209.67998
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
211.27742
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
211.27742
seq distance
False
chain
N
Details
Redox score
67.48
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
7.38
Half-sphere exposure sum
68
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
473
Residue number B
475
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.78732
seq distance
0
chain
A
Factor I module (FIM) 2
begin
771
end
843
score
100.0
distance
2.78732
seq distance
0
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
48
chain
A
Factor I module (FIM) 1
begin
695
end
770
score
99.46172248803828
distance
4.2923
seq distance
48
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.9612045
seq distance
23
chain
A
LDL-receptor class A
begin
795
end
795
score
70.45454545454545
distance
7.9612045
seq distance
23
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
25.152733
seq distance
106
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
712
score
50.0
distance
25.152733
seq distance
106
chain
A
Details
Redox score
67.15
PDB code
2wcy
Structure name
nmr solution structure of factor i-like modules of complement c7.
Structure deposition date
2009-03-17
Thiol separation (Å)
9.83
Half-sphere exposure sum
69
Minimum pKa
nan
% buried
19
Peptide accession
P10643
Residue number A
818
Residue number B
825
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.7987742
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.7987742
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
5.273106
seq distance
380
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
5.273106
seq distance
380
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
5.3191686
seq distance
4
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
5.3191686
seq distance
4
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.938999
seq distance
27
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.938999
seq distance
27
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.512271
seq distance
43
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.512271
seq distance
43
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
16.885994
seq distance
48
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
16.885994
seq distance
48
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.166243
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.166243
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
23.625822
seq distance
317
chain
C
Disordered
begin
86
end
121
score
100.0
distance
23.625822
seq distance
317
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.176613
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
25.176613
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
25.221754
seq distance
40
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
25.221754
seq distance
40
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.91972
seq distance
71
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
27.91972
seq distance
71
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
27.923115
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
27.923115
seq distance
False
chain
D
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.197184
seq distance
81
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
28.197184
seq distance
81
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
28.586592
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
28.586592
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
28.967176
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
28.967176
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
29.125893
seq distance
72
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
29.125893
seq distance
72
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.070145
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.070145
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
37.465393
seq distance
False
chain
B
LDL-receptor class A
begin
61
end
99
score
100.0
distance
39.046356
seq distance
339
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
39.046356
seq distance
339
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
45.165287
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
45.165287
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
45.70498
seq distance
False
chain
B
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.596878
seq distance
220
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
46.596878
seq distance
220
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.13991
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.13991
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.13991
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.13991
seq distance
False
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.656612
seq distance
332
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.656612
seq distance
332
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.397068
seq distance
96
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
52.397068
seq distance
96
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
57.625233
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
57.625233
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
57.9083
seq distance
143
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
57.9083
seq distance
143
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
59.298843
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
59.298843
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
61.408623
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
61.408623
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
61.94432
seq distance
114
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
61.94432
seq distance
114
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
63.22599
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
63.22599
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.15015
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.15015
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
68.77994
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
68.77994
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.03622
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.03622
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
82.19877
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
82.19877
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.61567
seq distance
240
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
86.61567
seq distance
240
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
88.13071
seq distance
156
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
88.13071
seq distance
156
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.42111
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.42111
seq distance
False
chain
H
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
93.033485
seq distance
238
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
93.033485
seq distance
238
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
95.290886
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
95.290886
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
99.864075
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
99.864075
seq distance
False
chain
I
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.6835
seq distance
209
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
100.6835
seq distance
209
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.460335
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.460335
seq distance
False
chain
G
Disordered
begin
327
end
328
score
61.36363636363637
distance
106.77992
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
106.77992
seq distance
False
chain
I
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.244446
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.244446
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.9472
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
108.9472
seq distance
False
chain
I
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
112.51329
seq distance
214
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
112.51329
seq distance
214
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.54856
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.54856
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.3035
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.3035
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
134.3428
seq distance
222
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
134.3428
seq distance
222
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.93285
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
136.93285
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
147.21188
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
147.21188
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.68898
seq distance
298
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
159.68898
seq distance
298
chain
C
Details
Redox score
66.24
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
8.08
Half-sphere exposure sum
76
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
460 (Residue 438 in this structure)
Residue number B
473 (Residue 451 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
MACPF
begin
124
end
456
score
98.9079989079989
distance
2.8091636
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
2.8091636
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8127024
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8127024
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
3.1448064
seq distance
43
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
3.1448064
seq distance
43
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
6.2438025
seq distance
375
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
6.2438025
seq distance
375
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.381221
seq distance
64
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.381221
seq distance
64
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.381221
seq distance
59
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.381221
seq distance
59
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.29998
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.29998
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.010685
seq distance
88
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.010685
seq distance
88
chain
D
Disordered
begin
108
end
143
score
100.0
distance
23.977854
seq distance
312
chain
D
Disordered
begin
108
end
143
score
100.0
distance
23.977854
seq distance
312
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
24.206007
seq distance
35
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
24.206007
seq distance
35
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.814257
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.814257
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.611002
seq distance
66
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.611002
seq distance
66
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
31.688251
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
31.688251
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.66142
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.66142
seq distance
False
chain
C
LDL-receptor class A
begin
83
end
121
score
100.0
distance
39.11544
seq distance
334
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
39.11544
seq distance
334
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
43.671814
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
43.671814
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
43.83087
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
43.83087
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.132664
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.132664
seq distance
False
chain
X
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.615536
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.615536
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.615536
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.615536
seq distance
False
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.727745
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.727745
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.78856
seq distance
115
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.78856
seq distance
115
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
52.097977
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
52.097977
seq distance
False
chain
X
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.54426
seq distance
159
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.54426
seq distance
159
chain
D
Disordered
begin
219
end
240
score
100.0
distance
53.602844
seq distance
215
chain
D
Disordered
begin
219
end
240
score
100.0
distance
53.602844
seq distance
215
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
54.424034
seq distance
327
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
54.424034
seq distance
327
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.230427
seq distance
130
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.230427
seq distance
130
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
60.431168
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
60.431168
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
61.152653
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
61.152653
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.47657
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.47657
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.9398
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.9398
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
72.38043
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
72.38043
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
74.125046
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
74.125046
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
75.87101
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
75.87101
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
76.20298
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
76.20298
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.28161
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.28161
seq distance
False
chain
W
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.05372
seq distance
172
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.05372
seq distance
172
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.32017
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.32017
seq distance
False
chain
P
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
91.0171
seq distance
235
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
91.0171
seq distance
235
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.77431
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.77431
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.83532
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.83532
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.45212
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.45212
seq distance
False
chain
X
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.2397
seq distance
225
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.2397
seq distance
225
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
97.30049
seq distance
233
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
97.30049
seq distance
233
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
101.2665
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
101.2665
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.79817
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.79817
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
105.08612
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
105.08612
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.321686
seq distance
230
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.321686
seq distance
230
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.07703
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.07703
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
108.49451
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
108.49451
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
109.465675
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
109.465675
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.5141
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.5141
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.47538
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.47538
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.761375
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.761375
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.45769
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.45769
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
124.31569
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
124.31569
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
127.294395
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
127.294395
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.73914
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.73914
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
131.5142
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
131.5142
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.25174
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.25174
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
134.90569
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
134.90569
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.02954
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.02954
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.1529
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.1529
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.2069
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.2069
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.69763
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.69763
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
148.73639
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
148.73639
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
149.17294
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
149.17294
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.56256
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.56256
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.84857
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.84857
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
155.3754
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
155.3754
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
155.46083
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
155.46083
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
158.41217
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
158.41217
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.93526
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.93526
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
162.0067
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
162.0067
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.86465
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.86465
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
167.43416
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
167.43416
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.58054
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.58054
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.04742
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.04742
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.029
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.029
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.36115
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.36115
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.11276
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.11276
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.95746
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.95746
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
176.00465
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
176.00465
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.65042
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.65042
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.74672
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.74672
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.73654
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.73654
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.44815
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.44815
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.12909
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.12909
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.70546
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.70546
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.21909
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.21909
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.16441
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.16441
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.22327
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.22327
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.04669
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.04669
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.02576
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.02576
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.42569
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.42569
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.20448
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.20448
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.80765
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.80765
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.4786
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.4786
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.48592
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.48592
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.48701
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.48701
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
204.76187
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
204.76187
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.11208
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.11208
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.40063
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.40063
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.09174
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.09174
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.19318
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.19318
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.49088
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.49088
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.98016
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.98016
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
215.45923
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
215.45923
seq distance
False
chain
N
Details
Redox score
65.32
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
8.4
Half-sphere exposure sum
70
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
455
Residue number B
457
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.7957351
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.7957351
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8127024
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.8127024
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
3.7485821
seq distance
1
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
3.7485821
seq distance
1
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
6.2438025
seq distance
377
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
6.2438025
seq distance
377
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.583976
seq distance
11
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.583976
seq distance
11
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.633959
seq distance
16
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.633959
seq distance
16
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.29998
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.29998
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.404346
seq distance
40
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.404346
seq distance
40
chain
D
Disordered
begin
108
end
143
score
100.0
distance
23.977854
seq distance
314
chain
D
Disordered
begin
108
end
143
score
100.0
distance
23.977854
seq distance
314
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
25.832808
seq distance
37
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
25.832808
seq distance
37
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
29.831944
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
29.831944
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.611002
seq distance
68
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.611002
seq distance
68
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
31.688251
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
31.688251
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.66142
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
34.66142
seq distance
False
chain
C
LDL-receptor class A
begin
83
end
121
score
100.0
distance
39.68376
seq distance
336
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
39.68376
seq distance
336
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
45.068157
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
45.068157
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
45.245262
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
45.245262
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.55111
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.55111
seq distance
False
chain
X
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.615536
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.615536
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.615536
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.615536
seq distance
False
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.727745
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.727745
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.857265
seq distance
67
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.857265
seq distance
67
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.4999
seq distance
111
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.4999
seq distance
111
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
53.03058
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
53.03058
seq distance
False
chain
X
Disordered
begin
219
end
240
score
100.0
distance
53.602844
seq distance
217
chain
D
Disordered
begin
219
end
240
score
100.0
distance
53.602844
seq distance
217
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
54.424034
seq distance
329
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
54.424034
seq distance
329
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.036705
seq distance
82
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.036705
seq distance
82
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
60.431168
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
60.431168
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
61.152653
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
61.152653
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.9398
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.9398
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.7685
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.7685
seq distance
False
chain
X
Disordered
begin
138
end
138
score
50.0
distance
72.38043
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
72.38043
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.036575
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.036575
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
75.87101
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
75.87101
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
77.039696
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
77.039696
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.43329
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.43329
seq distance
False
chain
W
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.32133
seq distance
124
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.32133
seq distance
124
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.32017
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.32017
seq distance
False
chain
P
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
91.0171
seq distance
237
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
91.0171
seq distance
237
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.184616
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.184616
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.83532
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
94.83532
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.45212
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.45212
seq distance
False
chain
X
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
97.30049
seq distance
235
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
97.30049
seq distance
235
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.601494
seq distance
177
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.601494
seq distance
177
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
102.585846
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
102.585846
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.79817
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.79817
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
106.228424
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
106.228424
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.69588
seq distance
182
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.69588
seq distance
182
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.07703
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.07703
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
109.465675
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
109.465675
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
109.85549
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
109.85549
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.5141
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.5141
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.013374
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.013374
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.761375
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.761375
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.45769
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.45769
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
124.31569
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
124.31569
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
127.294395
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
127.294395
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.73914
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.73914
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.89888
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.89888
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.79509
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.79509
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
134.90569
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
134.90569
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
136.68352
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
136.68352
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.1529
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.1529
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.2069
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.2069
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.69763
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.69763
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
148.73639
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
148.73639
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
149.17294
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
149.17294
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.56256
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.56256
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.91403
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.91403
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
157.0376
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
157.0376
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.06711
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.06711
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
158.41217
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
158.41217
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.93526
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
160.93526
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
162.0067
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
162.0067
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.86465
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.86465
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
167.50975
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
167.50975
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.58054
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.58054
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.04742
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.04742
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.029
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
173.029
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.36115
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.36115
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.95746
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.95746
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.56685
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.56685
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.65042
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.65042
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.72557
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.72557
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.74672
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.74672
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.73654
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.73654
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.44815
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.44815
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.12909
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.12909
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.70546
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.70546
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.21909
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.21909
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.16441
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.16441
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.22327
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.22327
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.04669
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.04669
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.02576
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.02576
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.42569
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.42569
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.48557
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.48557
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.5015
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.5015
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.4786
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.4786
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.48592
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.48592
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.48701
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
199.48701
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
204.76187
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
204.76187
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.11208
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.11208
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.40063
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.40063
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.09174
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.09174
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.19318
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.19318
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.49088
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
212.49088
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.98016
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.98016
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
215.45923
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
215.45923
seq distance
False
chain
N
Details
Redox score
65.2
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
8.71
Half-sphere exposure sum
64
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
457
Residue number B
505
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
EGF-like
begin
435
end
465
score
100.0
distance
2.7987742
seq distance
0
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
2.7987742
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.8384473
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.8384473
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
5.3191686
seq distance
17
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
5.3191686
seq distance
17
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.938999
seq distance
27
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
10.938999
seq distance
27
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.722659
seq distance
43
chain
C
Disordered
begin
494
end
516
score
100.0
distance
12.722659
seq distance
43
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
16.885994
seq distance
48
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
16.885994
seq distance
48
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
19.483156
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
19.483156
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
19.996948
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
19.996948
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
20.850302
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
20.850302
seq distance
False
chain
D
Disordered
begin
86
end
121
score
100.0
distance
23.625822
seq distance
80
chain
C
Disordered
begin
86
end
121
score
100.0
distance
23.625822
seq distance
80
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
24.179226
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
24.179226
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
26.507042
seq distance
53
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
26.507042
seq distance
53
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
29.125893
seq distance
72
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
29.125893
seq distance
72
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
30.401018
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
30.401018
seq distance
False
chain
D
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
31.420965
seq distance
94
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
31.420965
seq distance
94
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
32.94554
seq distance
84
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
32.94554
seq distance
84
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
35.99026
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
35.99026
seq distance
False
chain
B
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.59131
seq distance
55
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
38.59131
seq distance
55
chain
C
Disordered
begin
564
end
573
score
62.272727272727266
distance
41.75662
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
41.75662
seq distance
False
chain
B
Disordered
begin
91
end
92
score
68.18181818181817
distance
46.674847
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
46.674847
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
46.674847
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
46.674847
seq distance
False
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.215897
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.215897
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
48.42753
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
48.42753
seq distance
False
chain
B
Sushi 1
begin
547
end
606
score
100.0
distance
49.095844
seq distance
96
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
49.095844
seq distance
96
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.81832
seq distance
100
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
51.81832
seq distance
100
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
53.608536
seq distance
191
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
53.608536
seq distance
191
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
54.835365
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
54.835365
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
55.629402
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
55.629402
seq distance
False
chain
E
CCP 2
begin
594
end
671
score
100.0
distance
55.88239
seq distance
143
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
55.88239
seq distance
143
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
57.49708
seq distance
114
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
57.49708
seq distance
114
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
58.60731
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
58.60731
seq distance
False
chain
E
MACPF
begin
324
end
332
score
83.08080808080808
distance
63.683243
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
63.683243
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.58412
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.58412
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
73.38961
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
73.38961
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.20232
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
79.20232
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
84.372505
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
84.372505
seq distance
False
chain
H
Sushi 2
begin
607
end
668
score
100.0
distance
85.55278
seq distance
156
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
85.55278
seq distance
156
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.15724
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
90.15724
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
92.581856
seq distance
192
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
92.581856
seq distance
192
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.772224
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.772224
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
98.80885
seq distance
194
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
98.80885
seq distance
194
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
99.18899
seq distance
209
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
99.18899
seq distance
209
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.80971
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.80971
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
102.829384
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
102.829384
seq distance
False
chain
I
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.82245
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
107.82245
seq distance
False
chain
B
Disordered
begin
327
end
328
score
61.36363636363637
distance
108.935104
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
108.935104
seq distance
False
chain
I
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.21515
seq distance
214
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
111.21515
seq distance
214
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.243706
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
111.243706
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.28864
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.28864
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.14185
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.14185
seq distance
False
chain
H
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.29489
seq distance
222
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
133.29489
seq distance
222
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.85297
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.85297
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
147.21188
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
147.21188
seq distance
False
chain
A
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
158.16487
seq distance
298
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
158.16487
seq distance
298
chain
C
Details
Redox score
64.93
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
9
Half-sphere exposure sum
71
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
28 (Residue 6 in this structure)
Residue number B
473 (Residue 451 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
2.8017223
seq distance
0
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
2.8017223
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
7.9496393
seq distance
45
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
7.9496393
seq distance
45
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
12.9349985
seq distance
466
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
12.9349985
seq distance
466
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
14.255013
seq distance
4
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
14.255013
seq distance
4
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
20.527573
seq distance
421
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
20.527573
seq distance
421
chain
D
Disordered
begin
108
end
143
score
100.0
distance
26.523146
seq distance
29
chain
D
Disordered
begin
108
end
143
score
100.0
distance
26.523146
seq distance
29
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
27.276064
seq distance
378
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
27.276064
seq distance
378
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
27.853014
seq distance
493
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
27.853014
seq distance
493
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
29.937197
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
29.937197
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
30.457493
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
30.457493
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.599499
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.599499
seq distance
False
chain
C
Disordered
begin
516
end
538
score
100.0
distance
31.363056
seq distance
437
chain
D
Disordered
begin
516
end
538
score
100.0
distance
31.363056
seq distance
437
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
32.80958
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
32.80958
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
33.357956
seq distance
508
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
33.357956
seq distance
508
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
35.45213
seq distance
537
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
35.45213
seq distance
537
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
36.429207
seq distance
442
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
36.429207
seq distance
442
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
38.043858
seq distance
341
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
38.043858
seq distance
341
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
45.416668
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
45.416668
seq distance
False
chain
F
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.32755
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.32755
seq distance
False
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
46.44539
seq distance
49
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
46.44539
seq distance
49
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
54.83163
seq distance
310
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
54.83163
seq distance
310
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
57.251286
seq distance
550
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
57.251286
seq distance
550
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
59.07035
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
59.07035
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
59.84596
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
59.84596
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
60.962616
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
60.962616
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
62.901337
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
62.901337
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
66.47826
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
66.47826
seq distance
False
chain
X
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
69.81311
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
69.81311
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
71.728546
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
71.728546
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
73.30201
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
73.30201
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
73.47239
seq distance
603
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
73.47239
seq distance
603
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.78802
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.78802
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
80.51579
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
80.51579
seq distance
False
chain
A
Disordered
begin
138
end
138
score
50.0
distance
80.581314
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
80.581314
seq distance
False
chain
E
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
83.879
seq distance
608
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
83.879
seq distance
608
chain
D
Disordered
begin
219
end
240
score
100.0
distance
86.517334
seq distance
140
chain
D
Disordered
begin
219
end
240
score
100.0
distance
86.517334
seq distance
140
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.44713
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.44713
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.83138
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.83138
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
96.55723
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
96.55723
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
96.67438
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
96.67438
seq distance
False
chain
P
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
98.70755
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
98.70755
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
99.43291
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
99.43291
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.50595
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
103.50595
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
113.19602
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
113.19602
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
118.79022
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
118.79022
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
119.106674
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
119.106674
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
123.53208
seq distance
141
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
123.53208
seq distance
141
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.0993
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
124.0993
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
125.42502
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
125.42502
seq distance
False
chain
V
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
129.62904
seq distance
143
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
129.62904
seq distance
143
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
129.798
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
129.798
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.06062
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.06062
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
134.08281
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
134.08281
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.47398
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.47398
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
139.56845
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
139.56845
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.8049
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.8049
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
142.72763
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
142.72763
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
149.15054
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
149.15054
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
149.26888
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
149.26888
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.97208
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.97208
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.14948
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.14948
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.15565
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
153.15565
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
154.03996
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
154.03996
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.7038
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
157.7038
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
163.96593
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
163.96593
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.77808
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.77808
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.71075
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.71075
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.623
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.623
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
170.28543
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
170.28543
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.08664
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.08664
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.11081
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.11081
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.39928
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
175.39928
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.42587
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.42587
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.81737
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.81737
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
182.22621
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
182.22621
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.90173
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
182.90173
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.43373
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.43373
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
187.96147
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
187.96147
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.97722
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.97722
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
190.48793
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
190.48793
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
191.48347
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
191.48347
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.71967
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
192.71967
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.63216
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
193.63216
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
194.35948
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
194.35948
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
197.11293
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
197.11293
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
198.90236
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
198.90236
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.4195
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.4195
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.67833
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.67833
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.78476
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.78476
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.24123
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.24123
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
201.88948
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
201.88948
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.50058
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.50058
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.75708
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.75708
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
207.08311
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
207.08311
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.31757
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.31757
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
208.33838
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
208.33838
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
210.79982
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
210.79982
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
211.04778
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
211.04778
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
211.7481
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
211.7481
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
212.20178
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
212.20178
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
215.53268
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
215.53268
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
217.3602
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
217.3602
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
218.57211
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
218.57211
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
218.5723
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
218.5723
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
219.14255
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
219.14255
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.69357
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.69357
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.79768
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.79768
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.10211
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.10211
seq distance
False
chain
N
Details
Redox score
64.75
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
8.75
Half-sphere exposure sum
61
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
39
Residue number B
79
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.757768
seq distance
0
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.757768
seq distance
0
chain
C
Disordered
begin
86
end
121
score
100.0
distance
4.3414235
seq distance
17
chain
C
Disordered
begin
86
end
121
score
100.0
distance
4.3414235
seq distance
17
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
8.758229
seq distance
33
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
8.758229
seq distance
33
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
12.3690605
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
12.3690605
seq distance
False
chain
D
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
16.570862
seq distance
5
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
16.570862
seq distance
5
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
16.726353
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
16.726353
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
19.655361
seq distance
454
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
19.655361
seq distance
454
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
20.837814
seq distance
37
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
20.837814
seq distance
37
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.608892
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.608892
seq distance
False
chain
D
TSP type-1 2
begin
478
end
527
score
100.0
distance
27.668177
seq distance
409
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
27.668177
seq distance
409
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.963488
seq distance
329
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.963488
seq distance
329
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
32.251713
seq distance
288
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
32.251713
seq distance
288
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.97331
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.97331
seq distance
False
chain
E
EGF-like
begin
435
end
465
score
100.0
distance
35.278004
seq distance
366
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
35.278004
seq distance
366
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
36.303062
seq distance
478
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
36.303062
seq distance
478
chain
C
Disordered
begin
494
end
516
score
100.0
distance
40.55257
seq distance
425
chain
C
Disordered
begin
494
end
516
score
100.0
distance
40.55257
seq distance
425
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
42.668194
seq distance
298
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
42.668194
seq distance
298
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
43.555374
seq distance
496
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
43.555374
seq distance
496
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
44.135193
seq distance
525
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
44.135193
seq distance
525
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
47.36704
seq distance
430
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
47.36704
seq distance
430
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
47.809998
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
47.809998
seq distance
False
chain
E
Disordered
begin
504
end
504
score
68.18181818181817
distance
50.484154
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
50.484154
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
51.135777
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
51.135777
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
52.387966
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
52.387966
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
54.220146
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
54.220146
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
55.533157
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
55.533157
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
55.985012
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
55.985012
seq distance
False
chain
D
MACPF
begin
324
end
332
score
83.08080808080808
distance
57.742043
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
57.742043
seq distance
False
chain
G
Sushi 2
begin
607
end
668
score
100.0
distance
58.577534
seq distance
538
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
58.577534
seq distance
538
chain
C
Disordered
begin
138
end
138
score
50.0
distance
60.148308
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
60.148308
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
62.49762
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
62.49762
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
68.93691
seq distance
591
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
68.93691
seq distance
591
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.36849
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.36849
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
69.71424
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
69.71424
seq distance
False
chain
B
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
70.07314
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
70.07314
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
74.11725
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
74.11725
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
76.23648
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
76.23648
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.67362
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.67362
seq distance
False
chain
G
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
82.50409
seq distance
596
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
82.50409
seq distance
596
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.613235
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.613235
seq distance
False
chain
H
Disordered
begin
197
end
218
score
76.85950413223141
distance
85.66048
seq distance
128
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
85.66048
seq distance
128
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
86.383766
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
86.383766
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.581696
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.581696
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
93.642136
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
93.642136
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
98.3066
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
98.3066
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
102.33391
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
102.33391
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
103.30091
seq distance
604
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
103.30091
seq distance
604
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
104.04583
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
104.04583
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
110.66222
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
110.66222
seq distance
False
chain
A
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
113.95088
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
113.95088
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.10994
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.10994
seq distance
False
chain
I
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.49324
seq distance
680
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.49324
seq distance
680
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.936035
seq distance
129
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.936035
seq distance
129
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.57964
seq distance
131
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.57964
seq distance
131
chain
C
Details
Redox score
64.36
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
9.11
Half-sphere exposure sum
67
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
85 (Residue 63 in this structure)
Residue number B
91 (Residue 69 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
LDL-receptor class A
begin
83
end
121
score
100.0
distance
2.8071914
seq distance
0
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
2.8071914
seq distance
0
chain
D
Disordered
begin
108
end
143
score
100.0
distance
2.8195877
seq distance
0
chain
D
Disordered
begin
108
end
143
score
100.0
distance
2.8195877
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
8.401839
seq distance
15
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
8.401839
seq distance
15
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
13.921476
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
13.921476
seq distance
False
chain
C
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
16.139687
seq distance
16
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
16.139687
seq distance
16
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
18.861853
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
18.861853
seq distance
False
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
21.112877
seq distance
19
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
21.112877
seq distance
19
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
21.4108
seq distance
436
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
21.4108
seq distance
436
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
28.518593
seq distance
391
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
28.518593
seq distance
391
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
28.958422
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
28.958422
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.059496
seq distance
311
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.059496
seq distance
311
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
35.912273
seq distance
463
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
35.912273
seq distance
463
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
36.09064
seq distance
348
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
36.09064
seq distance
348
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
37.05589
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
37.05589
seq distance
False
chain
F
Disordered
begin
516
end
538
score
100.0
distance
41.139782
seq distance
407
chain
D
Disordered
begin
516
end
538
score
100.0
distance
41.139782
seq distance
407
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
43.24064
seq distance
280
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
43.24064
seq distance
280
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
44.521667
seq distance
507
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
44.521667
seq distance
507
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
44.699226
seq distance
478
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
44.699226
seq distance
478
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
46.38438
seq distance
412
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
46.38438
seq distance
412
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.144688
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.144688
seq distance
False
chain
F
Disordered
begin
585
end
589
score
50.90909090909091
distance
53.411446
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
53.411446
seq distance
False
chain
B
EGF-like
begin
451
end
455
score
54.090909090909086
distance
53.99988
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
53.99988
seq distance
False
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
54.70882
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
54.70882
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
54.74447
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
54.74447
seq distance
False
chain
C
Disordered
begin
138
end
138
score
50.0
distance
56.77306
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
56.77306
seq distance
False
chain
E
Disordered
begin
41
end
41
score
70.45454545454545
distance
58.981544
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
58.981544
seq distance
False
chain
B
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
59.18024
seq distance
520
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
59.18024
seq distance
520
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
65.7578
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
65.7578
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
68.8456
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
68.8456
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
69.67851
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
69.67851
seq distance
False
chain
X
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
73.25477
seq distance
573
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
73.25477
seq distance
573
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
73.75797
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
73.75797
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.26886
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.26886
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.43301
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.43301
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.77908
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.77908
seq distance
False
chain
X
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
83.138985
seq distance
578
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
83.138985
seq distance
578
chain
D
Disordered
begin
219
end
240
score
100.0
distance
84.93689
seq distance
110
chain
D
Disordered
begin
219
end
240
score
100.0
distance
84.93689
seq distance
110
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
85.76481
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
85.76481
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
86.2522
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
86.2522
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
87.25461
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
87.25461
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.11372
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.11372
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
92.65043
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
92.65043
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
98.00616
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
98.00616
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
101.44372
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
101.44372
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.17166
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.17166
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
107.9416
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
107.9416
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
114.48764
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
114.48764
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
115.90324
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
115.90324
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
119.425995
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
119.425995
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
119.62219
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
119.62219
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
122.954124
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
122.954124
seq distance
False
chain
I
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
125.93419
seq distance
111
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
125.93419
seq distance
111
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
128.27806
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
128.27806
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.01164
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.01164
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
131.19922
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
131.19922
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
132.50764
seq distance
113
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
132.50764
seq distance
113
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.56183
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.56183
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.88132
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.88132
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
136.96484
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
136.96484
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.44514
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.44514
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
138.78247
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
138.78247
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
139.97292
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
139.97292
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
142.32332
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
142.32332
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.47185
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.47185
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
146.82303
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
146.82303
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.08264
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.08264
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.26784
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.26784
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.57748
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.57748
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
153.84068
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
153.84068
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
156.14648
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
156.14648
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
157.20737
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
157.20737
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
158.09445
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
158.09445
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.52798
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.52798
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
162.20734
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
162.20734
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
163.09
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
163.09
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.61046
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.61046
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.30913
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.30913
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.69565
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.69565
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.96455
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.96455
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.9659
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.9659
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.55692
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.55692
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
173.68163
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
173.68163
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.10037
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.10037
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.0846
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.0846
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.24532
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.24532
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.70834
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.70834
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.35744
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.35744
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.1801
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.1801
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
179.62912
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
179.62912
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.15259
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.15259
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.86095
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.86095
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
184.84392
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
184.84392
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.80556
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.80556
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.29291
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.29291
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.06778
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.06778
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
188.3154
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
188.3154
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.49103
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.49103
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.12431
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.12431
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.22182
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.22182
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
192.85153
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
192.85153
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.90959
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.90959
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
193.58197
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
193.58197
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
193.82417
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
193.82417
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.56978
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.56978
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.65276
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.65276
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.4485
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.4485
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.6084
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.6084
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.50763
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.50763
seq distance
False
chain
N
Details
Redox score
64.24
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
8.46
Half-sphere exposure sum
79
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
96
Residue number B
109
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.7930448
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.7930448
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8307612
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8307612
seq distance
0
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
3.6411123
seq distance
112
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
3.6411123
seq distance
112
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
10.901575
seq distance
41
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
10.901575
seq distance
41
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
13.151399
seq distance
67
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
13.151399
seq distance
67
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.205952
seq distance
66
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.205952
seq distance
66
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
25.595417
seq distance
136
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
25.595417
seq distance
136
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.050196
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.050196
seq distance
False
chain
D
Disordered
begin
494
end
516
score
100.0
distance
27.059101
seq distance
83
chain
C
Disordered
begin
494
end
516
score
100.0
distance
27.059101
seq distance
83
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
27.234606
seq distance
24
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
27.234606
seq distance
24
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
28.995426
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
28.995426
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
30.650164
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
30.650164
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.764166
seq distance
13
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.764166
seq distance
13
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
31.546877
seq distance
183
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
31.546877
seq distance
183
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
32.55497
seq distance
154
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
32.55497
seq distance
154
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
32.82318
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
32.82318
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
35.895897
seq distance
88
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
35.895897
seq distance
88
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
39.38075
seq distance
86
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
39.38075
seq distance
86
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
41.965195
seq distance
54
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
41.965195
seq distance
54
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
42.6399
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
42.6399
seq distance
False
chain
D
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
45.101166
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
45.101166
seq distance
False
chain
E
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.868824
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.868824
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
48.454334
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
48.454334
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
50.233944
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
50.233944
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.12728
seq distance
44
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.12728
seq distance
44
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
51.73646
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
51.73646
seq distance
False
chain
B
Sushi 2
begin
607
end
668
score
100.0
distance
54.444492
seq distance
196
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
54.444492
seq distance
196
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
59.410484
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
59.410484
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
66.39899
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
66.39899
seq distance
False
chain
B
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
67.07609
seq distance
249
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
67.07609
seq distance
249
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
67.281494
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
67.281494
seq distance
False
chain
G
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
68.28101
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
68.28101
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
69.04426
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
69.04426
seq distance
False
chain
A
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.712814
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
69.712814
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.44338
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.44338
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
77.678276
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
77.678276
seq distance
False
chain
F
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
79.96681
seq distance
254
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
79.96681
seq distance
254
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
86.48026
seq distance
177
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
86.48026
seq distance
177
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
89.12244
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
89.12244
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
89.567245
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
89.567245
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
90.81424
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
90.81424
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.92531
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.92531
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.09411
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.09411
seq distance
False
chain
G
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
101.822426
seq distance
262
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
101.822426
seq distance
262
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
108.911804
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
108.911804
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
112.70558
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
112.70558
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
114.47444
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
114.47444
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.21342
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.21342
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.7703
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.7703
seq distance
False
chain
H
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.090164
seq distance
338
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.090164
seq distance
338
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.40069
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.40069
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
126.601295
seq distance
178
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
126.601295
seq distance
178
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
132.8407
seq distance
180
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
132.8407
seq distance
180
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.6124
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.6124
seq distance
False
chain
I
Details
Redox score
63.26
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
9.48
Half-sphere exposure sum
68
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
42 (Residue 20 in this structure)
Residue number B
433 (Residue 411 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
2.8195474
seq distance
0
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
2.8195474
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
9.205395
seq distance
82
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
9.205395
seq distance
82
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
14.626666
seq distance
503
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
14.626666
seq distance
503
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
14.671783
seq distance
41
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
14.671783
seq distance
41
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
20.527573
seq distance
458
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
20.527573
seq distance
458
chain
D
Disordered
begin
108
end
143
score
100.0
distance
26.29767
seq distance
66
chain
D
Disordered
begin
108
end
143
score
100.0
distance
26.29767
seq distance
66
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
27.276064
seq distance
415
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
27.276064
seq distance
415
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
28.835049
seq distance
530
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
28.835049
seq distance
530
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
29.31418
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
29.31418
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
29.937197
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
29.937197
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.599499
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.599499
seq distance
False
chain
C
Disordered
begin
516
end
538
score
100.0
distance
31.363056
seq distance
474
chain
D
Disordered
begin
516
end
538
score
100.0
distance
31.363056
seq distance
474
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
31.397388
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
31.397388
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
33.982246
seq distance
545
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
33.982246
seq distance
545
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
36.077198
seq distance
574
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
36.077198
seq distance
574
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
36.429207
seq distance
479
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
36.429207
seq distance
479
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
39.178535
seq distance
378
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
39.178535
seq distance
378
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
43.713997
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
43.713997
seq distance
False
chain
F
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.32755
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
46.32755
seq distance
False
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
46.388264
seq distance
86
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
46.388264
seq distance
86
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
54.999157
seq distance
347
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
54.999157
seq distance
347
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
57.597435
seq distance
587
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
57.597435
seq distance
587
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
59.07035
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
59.07035
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
61.196587
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
61.196587
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
61.863148
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
61.863148
seq distance
False
chain
B
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
62.49491
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
62.49491
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
66.47826
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
66.47826
seq distance
False
chain
X
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
69.81311
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
69.81311
seq distance
False
chain
F
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
71.728546
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
71.728546
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
72.1767
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
72.1767
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
73.98962
seq distance
640
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
73.98962
seq distance
640
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.113785
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.113785
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
80.63583
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
80.63583
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
82.22271
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
82.22271
seq distance
False
chain
A
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
84.45639
seq distance
645
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
84.45639
seq distance
645
chain
D
Disordered
begin
219
end
240
score
100.0
distance
86.517334
seq distance
177
chain
D
Disordered
begin
219
end
240
score
100.0
distance
86.517334
seq distance
177
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
91.30125
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
91.30125
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.742
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.742
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
95.51307
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
95.51307
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
96.55723
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
96.55723
seq distance
False
chain
W
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
99.92931
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
99.92931
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
100.36115
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
100.36115
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.00084
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.00084
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.4846
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.4846
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.34743
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
117.34743
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
117.99135
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
117.99135
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
123.53208
seq distance
178
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
123.53208
seq distance
178
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
125.13518
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
125.13518
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
126.97246
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
126.97246
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
128.37503
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
128.37503
seq distance
False
chain
P
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
129.62904
seq distance
180
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
129.62904
seq distance
180
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.06062
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.06062
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.42274
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.42274
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.47398
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.47398
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
138.54741
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
138.54741
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.8049
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
139.8049
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
141.40938
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
141.40938
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.97208
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.97208
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
150.49947
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
150.49947
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
150.7638
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
150.7638
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.14948
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.14948
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
152.74318
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
152.74318
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.31435
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.31435
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
156.81152
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
156.81152
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
162.80011
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
162.80011
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.77808
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.77808
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.71075
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
165.71075
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.58029
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.58029
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
171.41669
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
171.41669
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.37593
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
172.37593
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
173.36047
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
173.36047
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
174.26021
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
174.26021
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.42587
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.42587
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.81737
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
178.81737
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
181.23854
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
181.23854
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
183.6457
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
183.6457
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.87796
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
184.87796
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.86093
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.86093
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.8907
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.8907
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
190.48793
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
190.48793
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.52003
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.52003
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.67854
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.67854
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
193.24158
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
193.24158
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
194.00024
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
194.00024
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.32521
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
196.32521
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.19818
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.19818
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.44087
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
199.44087
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.52974
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
199.52974
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
200.19261
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
200.19261
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.31256
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
201.31256
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.54616
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
202.54616
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.65755
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
206.65755
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
207.52794
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
207.52794
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
207.5736
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
207.5736
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.76852
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.76852
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
207.87053
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
207.87053
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
211.13304
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
211.13304
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
211.7077
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
211.7077
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
212.15472
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
212.15472
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
212.67522
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
212.67522
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
215.1952
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
215.1952
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
217.5155
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
217.5155
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
218.47813
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
218.47813
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
218.62561
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
218.62561
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
219.10179
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
219.10179
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.52138
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.52138
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.96284
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
225.96284
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.07895
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
228.07895
seq distance
False
chain
N
Details
Redox score
63.23
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
9.74
Half-sphere exposure sum
57
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
39
Residue number B
42
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.7957351
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
2.7957351
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.817923
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.817923
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
3.7485821
seq distance
17
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
3.7485821
seq distance
17
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
4.9242854
seq distance
393
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
4.9242854
seq distance
393
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.583976
seq distance
11
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.583976
seq distance
11
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.633959
seq distance
16
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.633959
seq distance
16
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.075468
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.075468
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.404346
seq distance
40
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.404346
seq distance
40
chain
D
Disordered
begin
108
end
143
score
100.0
distance
25.213755
seq distance
330
chain
D
Disordered
begin
108
end
143
score
100.0
distance
25.213755
seq distance
330
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
26.21846
seq distance
53
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
26.21846
seq distance
53
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
29.831944
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
29.831944
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.151415
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.151415
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.95345
seq distance
84
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.95345
seq distance
84
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.892204
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.892204
seq distance
False
chain
C
LDL-receptor class A
begin
83
end
121
score
100.0
distance
40.086674
seq distance
352
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
40.086674
seq distance
352
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
45.068157
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
45.068157
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
45.245262
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
45.245262
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.55111
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.55111
seq distance
False
chain
X
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.76474
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.76474
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.76474
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.76474
seq distance
False
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.504467
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.504467
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.857265
seq distance
67
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.857265
seq distance
67
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.4999
seq distance
111
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.4999
seq distance
111
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
53.03058
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
53.03058
seq distance
False
chain
X
Disordered
begin
219
end
240
score
100.0
distance
53.23708
seq distance
233
chain
D
Disordered
begin
219
end
240
score
100.0
distance
53.23708
seq distance
233
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.598724
seq distance
345
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
55.598724
seq distance
345
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
58.81717
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
58.81717
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.036705
seq distance
82
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.036705
seq distance
82
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
60.72509
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
60.72509
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.87364
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.87364
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.7685
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
68.7685
seq distance
False
chain
X
Disordered
begin
138
end
138
score
50.0
distance
73.378525
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
73.378525
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
74.43596
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
74.43596
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.036575
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.036575
seq distance
False
chain
A
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
77.039696
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
77.039696
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.43329
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
82.43329
seq distance
False
chain
W
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.32133
seq distance
124
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.32133
seq distance
124
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.37201
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.37201
seq distance
False
chain
P
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
90.31529
seq distance
253
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
90.31529
seq distance
253
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.184616
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
93.184616
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.713486
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.713486
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
96.55792
seq distance
251
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
96.55792
seq distance
251
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.58512
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.58512
seq distance
False
chain
X
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.601494
seq distance
177
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.601494
seq distance
177
chain
D
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.5465
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.5465
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
102.585846
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
102.585846
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
106.228424
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
106.228424
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.69588
seq distance
182
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.69588
seq distance
182
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.57266
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.57266
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
108.38462
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
108.38462
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
109.85549
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
109.85549
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
110.73897
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
110.73897
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.013374
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.013374
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.79785
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.79785
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
121.19922
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
121.19922
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
123.39246
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
123.39246
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.241745
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.241745
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.16975
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.16975
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.89888
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
132.89888
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.79509
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.79509
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.79005
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.79005
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
136.68352
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
136.68352
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.42477
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.42477
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.45222
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.45222
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.35358
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.35358
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
148.35895
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
148.35895
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.68738
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.68738
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.04884
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.04884
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.59692
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
154.59692
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
157.0376
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
157.0376
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.06711
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.06711
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.89745
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.89745
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
161.88602
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
161.88602
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.9015
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.9015
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.56448
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.56448
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.0299
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.0299
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
168.94228
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
168.94228
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.94391
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.94391
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.94446
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.94446
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.50114
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.50114
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.70148
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.70148
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.91513
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.91513
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.72557
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
177.72557
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
178.91396
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
178.91396
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.54594
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.54594
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.85728
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.85728
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.83339
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.83339
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.7754
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.7754
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
184.01813
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
184.01813
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
184.89218
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
184.89218
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.2887
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.2887
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.72789
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.72789
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.67207
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.67207
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.8813
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.8813
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.43977
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.43977
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
190.9667
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
190.9667
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
194.62607
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
194.62607
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.49411
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.49411
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.77237
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.77237
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
200.77069
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
200.77069
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.31784
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.31784
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
206.45123
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
206.45123
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.4612
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.4612
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.90753
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.90753
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.49446
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.49446
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.60805
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.60805
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.55997
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.55997
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
216.32889
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
216.32889
seq distance
False
chain
N
Details
Redox score
62.97
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
9.96
Half-sphere exposure sum
63
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
473
Residue number B
505
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.757768
seq distance
0
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
2.757768
seq distance
0
chain
C
Disordered
begin
86
end
121
score
100.0
distance
4.3414235
seq distance
12
chain
C
Disordered
begin
86
end
121
score
100.0
distance
4.3414235
seq distance
12
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
7.3749647
seq distance
28
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
7.3749647
seq distance
28
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
12.3690605
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
12.3690605
seq distance
False
chain
D
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
16.078758
seq distance
11
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
16.078758
seq distance
11
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
16.726353
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
16.726353
seq distance
False
chain
D
CCP 1
begin
523
end
593
score
100.0
distance
18.425951
seq distance
449
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
18.425951
seq distance
449
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
20.837814
seq distance
32
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
20.837814
seq distance
32
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
26.017117
seq distance
404
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
26.017117
seq distance
404
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.608892
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
27.608892
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
29.757437
seq distance
324
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
29.757437
seq distance
324
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
32.251713
seq distance
283
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
32.251713
seq distance
283
chain
C
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.97331
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
32.97331
seq distance
False
chain
E
EGF-like
begin
435
end
465
score
100.0
distance
35.278004
seq distance
361
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
35.278004
seq distance
361
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
35.87312
seq distance
473
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
35.87312
seq distance
473
chain
C
Disordered
begin
494
end
516
score
100.0
distance
38.71365
seq distance
420
chain
C
Disordered
begin
494
end
516
score
100.0
distance
38.71365
seq distance
420
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
42.668194
seq distance
293
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
42.668194
seq distance
293
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
43.36116
seq distance
520
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
43.36116
seq distance
520
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
43.439095
seq distance
491
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
43.439095
seq distance
491
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
45.584404
seq distance
425
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
45.584404
seq distance
425
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
47.809998
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
47.809998
seq distance
False
chain
E
Disordered
begin
504
end
504
score
68.18181818181817
distance
49.90706
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
49.90706
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
51.135777
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
51.135777
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
52.288506
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
52.288506
seq distance
False
chain
B
Disordered
begin
510
end
522
score
53.67132867132868
distance
52.387966
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
52.387966
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
53.5764
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
53.5764
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
55.985012
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
55.985012
seq distance
False
chain
D
MACPF
begin
324
end
332
score
83.08080808080808
distance
57.742043
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
57.742043
seq distance
False
chain
G
Sushi 2
begin
607
end
668
score
100.0
distance
58.726513
seq distance
533
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
58.726513
seq distance
533
chain
C
Disordered
begin
138
end
138
score
50.0
distance
60.148308
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
60.148308
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
62.49762
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
62.49762
seq distance
False
chain
G
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
69.03604
seq distance
586
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
69.03604
seq distance
586
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.36849
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.36849
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
69.71424
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
69.71424
seq distance
False
chain
B
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
70.07314
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
70.07314
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
72.44719
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
72.44719
seq distance
False
chain
A
MACPF
begin
324
end
332
score
83.08080808080808
distance
76.23648
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
76.23648
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.67362
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.67362
seq distance
False
chain
G
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
82.49403
seq distance
591
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
82.49403
seq distance
591
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.613235
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.613235
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
85.422295
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
85.422295
seq distance
False
chain
B
Disordered
begin
197
end
218
score
76.85950413223141
distance
85.66048
seq distance
123
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
85.66048
seq distance
123
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.581696
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
91.581696
seq distance
False
chain
G
MACPF
begin
324
end
333
score
84.54545454545456
distance
93.642136
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
93.642136
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
98.3066
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
98.3066
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
102.33391
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
102.33391
seq distance
False
chain
I
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
103.35778
seq distance
599
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
103.35778
seq distance
599
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
104.04583
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
104.04583
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
110.91369
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
110.91369
seq distance
False
chain
A
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
113.95088
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
113.95088
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.10994
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
124.10994
seq distance
False
chain
I
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.79179
seq distance
675
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.79179
seq distance
675
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.936035
seq distance
124
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.936035
seq distance
124
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.57964
seq distance
126
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.57964
seq distance
126
chain
C
Details
Redox score
62.68
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
9.89
Half-sphere exposure sum
69
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
91 (Residue 69 in this structure)
Residue number B
96 (Residue 74 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
LDL-receptor class A
begin
83
end
121
score
100.0
distance
2.8064141
seq distance
0
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
2.8064141
seq distance
0
chain
D
Disordered
begin
108
end
143
score
100.0
distance
2.8195877
seq distance
0
chain
D
Disordered
begin
108
end
143
score
100.0
distance
2.8195877
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
8.401839
seq distance
15
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
8.401839
seq distance
15
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
13.921476
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
13.921476
seq distance
False
chain
C
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
16.605398
seq distance
5
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
16.605398
seq distance
5
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
18.861853
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
18.861853
seq distance
False
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
21.112877
seq distance
19
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
21.112877
seq distance
19
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
21.555008
seq distance
436
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
21.555008
seq distance
436
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
28.958422
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
28.958422
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.059496
seq distance
311
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
29.059496
seq distance
311
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
29.293835
seq distance
391
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
29.293835
seq distance
391
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
35.03134
seq distance
463
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
35.03134
seq distance
463
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
36.09064
seq distance
348
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
36.09064
seq distance
348
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
37.05589
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
37.05589
seq distance
False
chain
F
Disordered
begin
516
end
538
score
100.0
distance
42.33582
seq distance
407
chain
D
Disordered
begin
516
end
538
score
100.0
distance
42.33582
seq distance
407
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
43.24064
seq distance
280
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
43.24064
seq distance
280
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
43.852665
seq distance
478
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
43.852665
seq distance
478
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
43.966988
seq distance
507
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
43.966988
seq distance
507
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
47.20476
seq distance
412
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
47.20476
seq distance
412
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.144688
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
48.144688
seq distance
False
chain
F
EGF-like
begin
451
end
455
score
54.090909090909086
distance
53.99988
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
53.99988
seq distance
False
chain
C
Disordered
begin
585
end
589
score
50.90909090909091
distance
54.064705
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
54.064705
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
55.16839
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
55.16839
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
55.566906
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
55.566906
seq distance
False
chain
C
Disordered
begin
138
end
138
score
50.0
distance
56.77306
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
56.77306
seq distance
False
chain
E
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
57.570892
seq distance
520
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
57.570892
seq distance
520
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
58.981544
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
58.981544
seq distance
False
chain
B
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
65.7578
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
65.7578
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
69.64419
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
69.64419
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
70.63526
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
70.63526
seq distance
False
chain
X
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
71.622986
seq distance
573
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
71.622986
seq distance
573
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
73.75797
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
73.75797
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.183075
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
75.183075
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.43301
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
76.43301
seq distance
False
chain
F
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
81.514946
seq distance
578
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
81.514946
seq distance
578
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.77908
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
82.77908
seq distance
False
chain
X
Disordered
begin
219
end
240
score
100.0
distance
84.93689
seq distance
110
chain
D
Disordered
begin
219
end
240
score
100.0
distance
84.93689
seq distance
110
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
85.76481
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
85.76481
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
86.2522
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
86.2522
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
86.55658
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
86.55658
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.67565
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
92.67565
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
93.31866
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
93.31866
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
98.00616
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
98.00616
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
101.44372
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
101.44372
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.17166
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
105.17166
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
107.9416
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
107.9416
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
114.48764
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
114.48764
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
116.073135
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
116.073135
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
119.425995
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
119.425995
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
119.62219
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
119.62219
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
122.954124
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
122.954124
seq distance
False
chain
I
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
125.93419
seq distance
111
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
125.93419
seq distance
111
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
128.27806
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
128.27806
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.01164
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
130.01164
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
131.19922
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
131.19922
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
132.50764
seq distance
113
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
132.50764
seq distance
113
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.56183
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
134.56183
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.88132
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.88132
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
136.96484
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
136.96484
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.44514
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
137.44514
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
138.78247
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
138.78247
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
139.97292
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
139.97292
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
142.32332
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
142.32332
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.47185
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
146.47185
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
146.82303
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
146.82303
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.08264
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
150.08264
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.26784
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.26784
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.57748
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
152.57748
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
153.84068
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
153.84068
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
156.14648
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
156.14648
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
157.20737
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
157.20737
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
158.09445
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
158.09445
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.52798
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.52798
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
162.20734
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
162.20734
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
163.09
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
163.09
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.61046
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
164.61046
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.30913
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
167.30913
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.69565
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
167.69565
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.96455
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
169.96455
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.9659
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
170.9659
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.55692
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
172.55692
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
173.68163
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
173.68163
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.10037
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
174.10037
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.0846
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
175.0846
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.24532
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.24532
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.70834
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
175.70834
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.35744
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
176.35744
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.1801
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
177.1801
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
179.62912
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
179.62912
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.15259
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
182.15259
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.86095
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.86095
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
184.84392
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
184.84392
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.80556
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
185.80556
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.29291
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
186.29291
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.06778
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.06778
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
188.3154
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
188.3154
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.49103
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
189.49103
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.12431
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
191.12431
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.22182
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.22182
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
192.85153
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
192.85153
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.90959
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
192.90959
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
193.58197
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
193.58197
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
193.82417
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
193.82417
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.56978
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.56978
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.65276
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
195.65276
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.4485
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.4485
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.6084
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
201.6084
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.50763
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
203.50763
seq distance
False
chain
N
Details
Redox score
62.65
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
9.85
Half-sphere exposure sum
72
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
85
Residue number B
109
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.7431734
seq distance
0
chain
C
TSP type-1 1
begin
5
end
58
score
99.83164983164983
distance
2.7431734
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8307612
seq distance
0
chain
C
MACPF
begin
102
end
434
score
94.85394485394487
distance
2.8307612
seq distance
0
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
3.6411123
seq distance
112
chain
C
CCP 1
begin
523
end
593
score
100.0
distance
3.6411123
seq distance
112
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
10.901575
seq distance
4
chain
C
LDL-receptor class A
begin
61
end
99
score
100.0
distance
10.901575
seq distance
4
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
13.151399
seq distance
67
chain
C
TSP type-1 2
begin
478
end
527
score
100.0
distance
13.151399
seq distance
67
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.153767
seq distance
29
chain
C
Disordered
begin
86
end
121
score
100.0
distance
24.153767
seq distance
29
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
25.595417
seq distance
136
chain
C
Sushi 1
begin
547
end
606
score
100.0
distance
25.595417
seq distance
136
chain
C
Disordered
begin
494
end
516
score
100.0
distance
27.059101
seq distance
83
chain
C
Disordered
begin
494
end
516
score
100.0
distance
27.059101
seq distance
83
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
28.246048
seq distance
False
chain
D
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
28.246048
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
28.445395
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
28.445395
seq distance
False
chain
D
EGF-like
begin
435
end
465
score
100.0
distance
29.122662
seq distance
24
chain
C
EGF-like
begin
435
end
465
score
100.0
distance
29.122662
seq distance
24
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
30.224298
seq distance
False
chain
D
Disordered
begin
91
end
92
score
68.18181818181817
distance
30.224298
seq distance
False
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.764166
seq distance
13
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
398
score
100.0
distance
30.764166
seq distance
13
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
31.546877
seq distance
183
chain
C
CCP 2
begin
594
end
671
score
100.0
distance
31.546877
seq distance
183
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
32.55497
seq distance
154
chain
C
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
565
score
100.0
distance
32.55497
seq distance
154
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
34.346737
seq distance
False
chain
D
Disordered
begin
504
end
504
score
68.18181818181817
distance
34.346737
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
35.895897
seq distance
88
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
499
score
100.0
distance
35.895897
seq distance
88
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
39.38075
seq distance
49
chain
C
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
106
score
100.0
distance
39.38075
seq distance
49
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
41.965195
seq distance
54
chain
C
In C7D; dbSNP:rs121964921.
original residue
G
variation residue
R
position
357
score
100.0
distance
41.965195
seq distance
54
chain
C
Disordered
begin
510
end
522
score
53.67132867132868
distance
44.29556
seq distance
False
chain
D
Disordered
begin
510
end
522
score
53.67132867132868
distance
44.29556
seq distance
False
chain
D
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
44.568832
seq distance
False
chain
E
LDL-receptor class A
begin
83
end
95
score
50.87412587412587
distance
44.568832
seq distance
False
chain
E
EGF-like
begin
451
end
455
score
54.090909090909086
distance
48.19377
seq distance
False
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
48.19377
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
50.10141
seq distance
False
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
512
score
81.81818181818183
distance
50.10141
seq distance
False
chain
D
Disordered
begin
564
end
573
score
62.272727272727266
distance
50.233944
seq distance
False
chain
B
Disordered
begin
564
end
573
score
62.272727272727266
distance
50.233944
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.699936
seq distance
44
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
367
score
100.0
distance
51.699936
seq distance
44
chain
C
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
51.73646
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
566
score
86.36363636363636
distance
51.73646
seq distance
False
chain
B
Sushi 2
begin
607
end
668
score
100.0
distance
54.444492
seq distance
196
chain
C
Sushi 2
begin
607
end
668
score
100.0
distance
54.444492
seq distance
196
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
60.28008
seq distance
False
chain
E
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
60.28008
seq distance
False
chain
E
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
66.39899
seq distance
False
chain
B
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
25
score
54.54545454545454
distance
66.39899
seq distance
False
chain
B
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
67.07609
seq distance
249
chain
C
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
660
score
100.0
distance
67.07609
seq distance
249
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
67.62763
seq distance
False
chain
G
MACPF
begin
324
end
332
score
83.08080808080808
distance
67.62763
seq distance
False
chain
G
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
69.04426
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1040
score
54.54545454545454
distance
69.04426
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.21565
seq distance
False
chain
E
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
530
score
54.54545454545454
distance
69.21565
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
70.76614
seq distance
False
chain
E
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
532
score
54.54545454545454
distance
70.76614
seq distance
False
chain
E
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.87176
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
70.87176
seq distance
False
chain
G
Disordered
begin
138
end
138
score
50.0
distance
77.678276
seq distance
False
chain
F
Disordered
begin
138
end
138
score
50.0
distance
77.678276
seq distance
False
chain
F
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
79.96681
seq distance
254
chain
C
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
665
score
100.0
distance
79.96681
seq distance
254
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
87.189514
seq distance
140
chain
C
Disordered
begin
197
end
218
score
76.85950413223141
distance
87.189514
seq distance
140
chain
C
MACPF
begin
324
end
332
score
83.08080808080808
distance
89.50906
seq distance
False
chain
H
MACPF
begin
324
end
332
score
83.08080808080808
distance
89.50906
seq distance
False
chain
H
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
89.567245
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
693
score
50.0
distance
89.567245
seq distance
False
chain
B
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
90.75278
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
90.75278
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
94.245514
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
94.245514
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.075325
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
100.075325
seq distance
False
chain
G
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
101.822426
seq distance
262
chain
C
Factor I module (FIM) 1
begin
673
end
748
score
100.0
distance
101.822426
seq distance
262
chain
C
MACPF
begin
324
end
333
score
84.54545454545456
distance
109.25619
seq distance
False
chain
I
MACPF
begin
324
end
333
score
84.54545454545456
distance
109.25619
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
112.935936
seq distance
False
chain
I
Disordered
begin
327
end
328
score
61.36363636363637
distance
112.935936
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
114.47444
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
1560
score
50.0
distance
114.47444
seq distance
False
chain
A
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.506744
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
116.506744
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.74327
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.74327
seq distance
False
chain
H
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.090164
seq distance
338
chain
C
Factor I module (FIM) 2
begin
749
end
821
score
100.0
distance
126.090164
seq distance
338
chain
C
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.39899
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.39899
seq distance
False
chain
H
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.91915
seq distance
141
chain
C
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
198
score
72.72727272727273
distance
127.91915
seq distance
141
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.30167
seq distance
143
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
200
score
72.72727272727273
distance
134.30167
seq distance
143
chain
C
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.60835
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
139.60835
seq distance
False
chain
I
Details
Redox score
62.63
PDB code
7nyc
Structure name
cryoem structure of 3c9-smac
Structure deposition date
2021-03-22
Thiol separation (Å)
9.68
Half-sphere exposure sum
78
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
79 (Residue 57 in this structure)
Residue number B
433 (Residue 411 in this structure)
Peptide name
Complement component C7
A redox-regulated disulphide may form within Complement component C7 at these cysteines. However, the redox score of this cysteine pair is lower than any known redox-active disulphide.
Relevent regions
MACPF
begin
124
end
456
score
98.9079989079989
distance
2.8091636
seq distance
0
chain
D
MACPF
begin
124
end
456
score
98.9079989079989
distance
2.8091636
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.817923
seq distance
0
chain
D
EGF-like
begin
457
end
487
score
100.0
distance
2.817923
seq distance
0
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
3.1448064
seq distance
27
chain
D
TSP type-1 2
begin
500
end
549
score
100.0
distance
3.1448064
seq distance
27
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
4.9242854
seq distance
375
chain
D
TSP type-1 1
begin
27
end
80
score
99.83164983164983
distance
4.9242854
seq distance
375
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.381221
seq distance
48
chain
D
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
521
score
100.0
distance
9.381221
seq distance
48
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.381221
seq distance
43
chain
D
Disordered
begin
516
end
538
score
100.0
distance
9.381221
seq distance
43
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.075468
seq distance
False
chain
C
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
412
score
63.63636363636363
distance
21.075468
seq distance
False
chain
C
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.010685
seq distance
72
chain
D
CCP 1
begin
545
end
615
score
83.48271446862996
distance
22.010685
seq distance
72
chain
D
Disordered
begin
108
end
143
score
100.0
distance
24.192572
seq distance
312
chain
D
Disordered
begin
108
end
143
score
100.0
distance
24.192572
seq distance
312
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
24.206007
seq distance
35
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
420
score
100.0
distance
24.206007
seq distance
35
chain
D
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.814257
seq distance
False
chain
B
Disordered
begin
41
end
41
score
70.45454545454545
distance
28.814257
seq distance
False
chain
B
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.151415
seq distance
False
chain
C
Disordered
begin
504
end
504
score
68.18181818181817
distance
30.151415
seq distance
False
chain
C
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.95345
seq distance
66
chain
D
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
389
score
100.0
distance
31.95345
seq distance
66
chain
D
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.892204
seq distance
False
chain
C
EGF-like
begin
451
end
455
score
54.090909090909086
distance
32.892204
seq distance
False
chain
C
LDL-receptor class A
begin
83
end
121
score
100.0
distance
39.11544
seq distance
334
chain
D
LDL-receptor class A
begin
83
end
121
score
100.0
distance
39.11544
seq distance
334
chain
D
Disordered
begin
585
end
589
score
50.90909090909091
distance
43.671814
seq distance
False
chain
B
Disordered
begin
585
end
589
score
50.90909090909091
distance
43.671814
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
43.83087
seq distance
False
chain
B
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
587
score
68.18181818181817
distance
43.83087
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.132664
seq distance
False
chain
X
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
45.132664
seq distance
False
chain
X
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.76474
seq distance
False
chain
C
Disordered
begin
91
end
92
score
68.18181818181817
distance
48.76474
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.76474
seq distance
False
chain
C
LDL-receptor class A
begin
84
end
92
score
56.56565656565656
distance
48.76474
seq distance
False
chain
C
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.504467
seq distance
False
chain
F
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
414
score
54.54545454545454
distance
49.504467
seq distance
False
chain
F
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.78856
seq distance
99
chain
D
Sushi 1
begin
572
end
628
score
99.04306220095694
distance
50.78856
seq distance
99
chain
D
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
52.097977
seq distance
False
chain
X
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
52.097977
seq distance
False
chain
X
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.54426
seq distance
143
chain
D
CCP 2
begin
616
end
691
score
99.2822966507177
distance
52.54426
seq distance
143
chain
D
Disordered
begin
219
end
240
score
100.0
distance
53.23708
seq distance
215
chain
D
Disordered
begin
219
end
240
score
100.0
distance
53.23708
seq distance
215
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
54.60566
seq distance
327
chain
D
In dbSNP:rs2271708.
original residue
C
variation residue
R
position
128
score
100.0
distance
54.60566
seq distance
327
chain
D
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
58.81717
seq distance
False
chain
F
TSP type-1 2
begin
512
end
517
score
80.30303030303031
distance
58.81717
seq distance
False
chain
F
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.230427
seq distance
114
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
587
score
100.0
distance
59.230427
seq distance
114
chain
D
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
60.72509
seq distance
False
chain
F
LDL-receptor class A
begin
83
end
98
score
52.69886363636363
distance
60.72509
seq distance
False
chain
F
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.87364
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
66.87364
seq distance
False
chain
G
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.47657
seq distance
False
chain
X
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
67.47657
seq distance
False
chain
X
Disordered
begin
138
end
138
score
50.0
distance
73.378525
seq distance
False
chain
E
Disordered
begin
138
end
138
score
50.0
distance
73.378525
seq distance
False
chain
E
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
74.125046
seq distance
False
chain
A
Confirmed at protein level; dbSNP:rs1063499.
original residue
S
variation residue
T
position
1058
score
54.54545454545454
distance
74.125046
seq distance
False
chain
A
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
74.43596
seq distance
False
chain
F
In C7D; dbSNP:rs121964920.
original residue
R
variation residue
S
position
31
score
50.0
distance
74.43596
seq distance
False
chain
F
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
76.20298
seq distance
False
chain
W
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
76.20298
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.28161
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
81.28161
seq distance
False
chain
W
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.05372
seq distance
156
chain
D
Sushi 2
begin
629
end
690
score
99.56011730205279
distance
84.05372
seq distance
156
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.37201
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
89.37201
seq distance
False
chain
P
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
90.31529
seq distance
235
chain
D
In C7D; dbSNP:rs369349760.
original residue
R
variation residue
Q
position
220
score
100.0
distance
90.31529
seq distance
235
chain
D
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.77431
seq distance
False
chain
W
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
91.77431
seq distance
False
chain
W
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.713486
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
93.713486
seq distance
False
chain
G
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
96.55792
seq distance
233
chain
D
In dbSNP:rs75345202.
original residue
R
variation residue
H
position
222
score
100.0
distance
96.55792
seq distance
233
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.58512
seq distance
False
chain
X
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
96.58512
seq distance
False
chain
X
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.2397
seq distance
209
chain
D
In C7D; dbSNP:rs541873000.
original residue
E
variation residue
Q
position
682
score
100.0
distance
97.2397
seq distance
209
chain
D
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
101.2665
seq distance
False
chain
B
Confirmed at protein level; dbSNP:rs13157656.
original residue
T
variation residue
P
position
714
score
50.0
distance
101.2665
seq distance
False
chain
B
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.5465
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
102.5465
seq distance
False
chain
G
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
105.08612
seq distance
False
chain
V
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
105.08612
seq distance
False
chain
V
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.321686
seq distance
214
chain
D
In C7D; dbSNP:rs113187203.
original residue
R
variation residue
H
position
687
score
100.0
distance
106.321686
seq distance
214
chain
D
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.57266
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
107.57266
seq distance
False
chain
W
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
108.38462
seq distance
False
chain
G
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
108.38462
seq distance
False
chain
G
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
108.49451
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
108.49451
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
110.73897
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
110.73897
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.47538
seq distance
False
chain
V
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
114.47538
seq distance
False
chain
V
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.79785
seq distance
False
chain
P
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
116.79785
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.811295
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
120.811295
seq distance
False
chain
V
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
123.39246
seq distance
False
chain
P
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
123.39246
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.241745
seq distance
False
chain
P
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
126.241745
seq distance
False
chain
P
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.16975
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
130.16975
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
131.5142
seq distance
False
chain
U
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
131.5142
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.25174
seq distance
False
chain
U
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
133.25174
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.02954
seq distance
False
chain
U
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
135.02954
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.13664
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
135.13664
seq distance
False
chain
U
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.42477
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
138.42477
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.45222
seq distance
False
chain
H
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
138.45222
seq distance
False
chain
H
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.35358
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
147.35358
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
148.35895
seq distance
False
chain
H
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
148.35895
seq distance
False
chain
H
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.1548
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
149.1548
seq distance
False
chain
T
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.04884
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
152.04884
seq distance
False
chain
I
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.84857
seq distance
False
chain
T
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
152.84857
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
155.3754
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
155.3754
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
155.46083
seq distance
False
chain
T
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
155.46083
seq distance
False
chain
T
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.89745
seq distance
False
chain
I
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
157.89745
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
161.77962
seq distance
False
chain
S
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
161.77962
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.9015
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
161.9015
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.56448
seq distance
False
chain
J
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
163.56448
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
167.43416
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
167.43416
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.0299
seq distance
False
chain
I
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
168.0299
seq distance
False
chain
I
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.94391
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
171.94391
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.94446
seq distance
False
chain
K
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
172.94446
seq distance
False
chain
K
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.50114
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
173.50114
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.11276
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.11276
seq distance
False
chain
S
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.70148
seq distance
False
chain
J
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
174.70148
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
176.00465
seq distance
False
chain
S
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
176.00465
seq distance
False
chain
S
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
178.59416
seq distance
False
chain
R
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
178.59416
seq distance
False
chain
R
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.54594
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.54594
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.85728
seq distance
False
chain
L
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
179.85728
seq distance
False
chain
L
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.83339
seq distance
False
chain
M
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
181.83339
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.7754
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
183.7754
seq distance
False
chain
O
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
184.01813
seq distance
False
chain
M
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
184.01813
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
184.89218
seq distance
False
chain
J
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
184.89218
seq distance
False
chain
J
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.2887
seq distance
False
chain
Q
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
185.2887
seq distance
False
chain
Q
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.72789
seq distance
False
chain
N
Sushi 1
begin
256
end
257
score
69.31818181818183
distance
185.72789
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.67207
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
186.67207
seq distance
False
chain
N
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.8813
seq distance
False
chain
O
In dbSNP:rs3792646.
original residue
K
variation residue
Q
position
451
score
68.18181818181817
distance
187.8813
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.43977
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
188.43977
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.20448
seq distance
False
chain
R
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
189.20448
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.80765
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
192.80765
seq distance
False
chain
R
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.49411
seq distance
False
chain
K
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
198.49411
seq distance
False
chain
K
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.77237
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
198.77237
seq distance
False
chain
L
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
200.376
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
200.376
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.31784
seq distance
False
chain
M
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
205.31784
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.63887
seq distance
False
chain
Q
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
205.63887
seq distance
False
chain
Q
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.4612
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
206.4612
seq distance
False
chain
O
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.90753
seq distance
False
chain
N
Factor I module (FIM) 1
begin
306
end
306
score
72.72727272727273
distance
207.90753
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.49446
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
208.49446
seq distance
False
chain
L
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.60805
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
213.60805
seq distance
False
chain
O
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.55997
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
214.55997
seq distance
False
chain
M
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
216.32889
seq distance
False
chain
N
TSP type-1 2
begin
30
end
31
score
77.27272727272727
distance
216.32889
seq distance
False
chain
N
Details
Redox score
62.57
PDB code
6h04
Structure name
closed conformation of the membrane attack complex
Structure deposition date
2018-07-06
Thiol separation (Å)
9.96
Half-sphere exposure sum
69
Minimum pKa
nan
% buried
nan
Peptide accession
P10643
Residue number A
455
Residue number B
473
Peptide name
Complement component C7
If this tool was useful for finding a disulphide, please cite: